Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTPS1P17812 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.67■□□□□ 0.74
CTPS1P17812 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.67■□□□□ 0.74
CTPS1P17812 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.67■□□□□ 0.74
CTPS1P17812 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTPS1P17812 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTPS1P17812 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CTPS1P17812 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CTPS1P17812 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CTPS1P17812 KRT16P5-201ENST00000455284 522 ntBASIC19.67■□□□□ 0.74
CTPS1P17812 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTPS1P17812 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTPS1P17812 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CTPS1P17812 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTPS1P17812 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CTPS1P17812 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTPS1P17812 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.67■□□□□ 0.74
CTPS1P17812 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.66■□□□□ 0.74
CTPS1P17812 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTPS1P17812 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.66■□□□□ 0.74
CTPS1P17812 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTPS1P17812 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTPS1P17812 TUBB8P6-201ENST00000436895 1288 ntBASIC19.66■□□□□ 0.74
CTPS1P17812 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.66■□□□□ 0.74
CTPS1P17812 KRT18P16-201ENST00000510337 1294 ntBASIC19.66■□□□□ 0.74
CTPS1P17812 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.66■□□□□ 0.74
CTPS1P17812 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.66■□□□□ 0.74
CTPS1P17812 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTPS1P17812 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.66■□□□□ 0.74
CTPS1P17812 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CTPS1P17812 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.66■□□□□ 0.74
CTPS1P17812 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTPS1P17812 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTPS1P17812 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTPS1P17812 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.66■□□□□ 0.74
CTPS1P17812 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTPS1P17812 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTPS1P17812 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CTPS1P17812 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTPS1P17812 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.65■□□□□ 0.74
CTPS1P17812 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTPS1P17812 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CTPS1P17812 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTPS1P17812 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTPS1P17812 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.65■□□□□ 0.74
CTPS1P17812 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.65■□□□□ 0.74
CTPS1P17812 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.65■□□□□ 0.74
CTPS1P17812 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.65■□□□□ 0.74
CTPS1P17812 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTPS1P17812 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.65■□□□□ 0.74
CTPS1P17812 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.65■□□□□ 0.74
CTPS1P17812 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.65■□□□□ 0.74
CTPS1P17812 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTPS1P17812 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTPS1P17812 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CTPS1P17812 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.65■□□□□ 0.74
CTPS1P17812 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CTPS1P17812 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTPS1P17812 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CTPS1P17812 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTPS1P17812 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTPS1P17812 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.65■□□□□ 0.74
CTPS1P17812 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTPS1P17812 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTPS1P17812 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CTPS1P17812 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CTPS1P17812 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.64■□□□□ 0.74
CTPS1P17812 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CTPS1P17812 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTPS1P17812 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.64■□□□□ 0.73
CTPS1P17812 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTPS1P17812 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.64■□□□□ 0.73
CTPS1P17812 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.64■□□□□ 0.73
CTPS1P17812 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTPS1P17812 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTPS1P17812 AC066615.1-201ENST00000640911 628 ntBASIC19.64■□□□□ 0.73
CTPS1P17812 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTPS1P17812 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CTPS1P17812 HTR7P1-201ENST00000538670 1336 ntBASIC19.64■□□□□ 0.73
CTPS1P17812 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTPS1P17812 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CTPS1P17812 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTPS1P17812 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTPS1P17812 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTPS1P17812 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CTPS1P17812 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTPS1P17812 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTPS1P17812 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CTPS1P17812 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTPS1P17812 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTPS1P17812 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.63■□□□□ 0.73
CTPS1P17812 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTPS1P17812 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTPS1P17812 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTPS1P17812 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.63■□□□□ 0.73
CTPS1P17812 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.63■□□□□ 0.73
CTPS1P17812 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTPS1P17812 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CTPS1P17812 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CTPS1P17812 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms