Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TPM3P06753 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TPM3P06753 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TPM3P06753 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
TPM3P06753 KRT16P6-202ENST00000425692 1426 ntBASIC21.89■■□□□ 1.1
TPM3P06753 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
TPM3P06753 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TPM3P06753 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
TPM3P06753 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TPM3P06753 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TPM3P06753 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TPM3P06753 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
TPM3P06753 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TPM3P06753 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TPM3P06753 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.89■■□□□ 1.09
TPM3P06753 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.89■■□□□ 1.09
TPM3P06753 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TPM3P06753 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TPM3P06753 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TPM3P06753 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
TPM3P06753 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
TPM3P06753 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TPM3P06753 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TPM3P06753 AC005332.8-201ENST00000622750 2735 ntBASIC21.89■■□□□ 1.09
TPM3P06753 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TPM3P06753 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TPM3P06753 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TPM3P06753 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TPM3P06753 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
TPM3P06753 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TPM3P06753 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TPM3P06753 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TPM3P06753 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TPM3P06753 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TPM3P06753 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TPM3P06753 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.88■■□□□ 1.09
TPM3P06753 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TPM3P06753 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TPM3P06753 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TPM3P06753 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TPM3P06753 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.88■■□□□ 1.09
TPM3P06753 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
TPM3P06753 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.88■■□□□ 1.09
TPM3P06753 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.88■■□□□ 1.09
TPM3P06753 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
TPM3P06753 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TPM3P06753 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
TPM3P06753 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
TPM3P06753 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
TPM3P06753 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.88■■□□□ 1.09
TPM3P06753 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TPM3P06753 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TPM3P06753 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC21.87■■□□□ 1.09
TPM3P06753 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TPM3P06753 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TPM3P06753 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
TPM3P06753 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TPM3P06753 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.87■■□□□ 1.09
TPM3P06753 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.87■■□□□ 1.09
TPM3P06753 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TPM3P06753 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.87■■□□□ 1.09
TPM3P06753 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TPM3P06753 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TPM3P06753 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TPM3P06753 AL139246.5-201ENST00000606645 996 ntBASIC21.87■■□□□ 1.09
TPM3P06753 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TPM3P06753 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
TPM3P06753 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.87■■□□□ 1.09
TPM3P06753 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
TPM3P06753 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TPM3P06753 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
TPM3P06753 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TPM3P06753 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TPM3P06753 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TPM3P06753 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TPM3P06753 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC21.86■■□□□ 1.09
TPM3P06753 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TPM3P06753 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TPM3P06753 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TPM3P06753 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TPM3P06753 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
TPM3P06753 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
TPM3P06753 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TPM3P06753 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TPM3P06753 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TPM3P06753 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.86■■□□□ 1.09
TPM3P06753 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.86■■□□□ 1.09
TPM3P06753 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TPM3P06753 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.86■■□□□ 1.09
TPM3P06753 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TPM3P06753 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TPM3P06753 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
TPM3P06753 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TPM3P06753 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
TPM3P06753 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.86■■□□□ 1.09
TPM3P06753 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.86■■□□□ 1.09
TPM3P06753 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TPM3P06753 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.86■■□□□ 1.09
TPM3P06753 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.86■■□□□ 1.09
TPM3P06753 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms