Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.69■□□□□ 0.42
HMGN1P05114 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGN1P05114 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMGN1P05114 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
HMGN1P05114 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.69■□□□□ 0.42
HMGN1P05114 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
HMGN1P05114 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGN1P05114 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGN1P05114 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGN1P05114 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGN1P05114 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGN1P05114 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HMGN1P05114 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HMGN1P05114 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGN1P05114 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HMGN1P05114 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGN1P05114 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGN1P05114 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.68■□□□□ 0.42
HMGN1P05114 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGN1P05114 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HMGN1P05114 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGN1P05114 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGN1P05114 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.68■□□□□ 0.42
HMGN1P05114 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGN1P05114 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.68■□□□□ 0.42
HMGN1P05114 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGN1P05114 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HMGN1P05114 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.68■□□□□ 0.42
HMGN1P05114 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGN1P05114 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HMGN1P05114 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
HMGN1P05114 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGN1P05114 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HMGN1P05114 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGN1P05114 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGN1P05114 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.67■□□□□ 0.42
HMGN1P05114 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGN1P05114 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGN1P05114 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
HMGN1P05114 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGN1P05114 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGN1P05114 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGN1P05114 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
HMGN1P05114 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGN1P05114 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.67■□□□□ 0.42
HMGN1P05114 CNN2P6-201ENST00000439038 900 ntBASIC17.67■□□□□ 0.42
HMGN1P05114 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGN1P05114 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.67■□□□□ 0.42
HMGN1P05114 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HMGN1P05114 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGN1P05114 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HMGN1P05114 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGN1P05114 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.67■□□□□ 0.42
HMGN1P05114 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HMGN1P05114 AL138781.2-201ENST00000617896 1843 ntBASIC17.67■□□□□ 0.42
HMGN1P05114 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGN1P05114 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.67■□□□□ 0.42
HMGN1P05114 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGN1P05114 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGN1P05114 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.67■□□□□ 0.42
HMGN1P05114 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.67■□□□□ 0.42
HMGN1P05114 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.67■□□□□ 0.42
HMGN1P05114 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
HMGN1P05114 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGN1P05114 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGN1P05114 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGN1P05114 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGN1P05114 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGN1P05114 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGN1P05114 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGN1P05114 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.66■□□□□ 0.42
HMGN1P05114 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGN1P05114 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGN1P05114 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGN1P05114 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGN1P05114 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.66■□□□□ 0.42
HMGN1P05114 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGN1P05114 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGN1P05114 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.66■□□□□ 0.42
HMGN1P05114 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGN1P05114 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.66■□□□□ 0.42
HMGN1P05114 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGN1P05114 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN1P05114 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN1P05114 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN1P05114 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
HMGN1P05114 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN1P05114 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN1P05114 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN1P05114 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGN1P05114 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN1P05114 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HMGN1P05114 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGN1P05114 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN1P05114 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN1P05114 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HMGN1P05114 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.65■□□□□ 0.42
HMGN1P05114 DUX4L16-201ENST00000555130 1264 ntBASIC17.65■□□□□ 0.42
HMGN1P05114 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.65■□□□□ 0.42
HMGN1P05114 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms