Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
APPP05067 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
APPP05067 AC073130.3-201ENST00000624389 2278 ntBASIC23.46■■□□□ 1.35
APPP05067 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
APPP05067 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC23.45■■□□□ 1.35
APPP05067 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
APPP05067 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
APPP05067 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC23.45■■□□□ 1.35
APPP05067 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
APPP05067 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
APPP05067 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC23.45■■□□□ 1.35
APPP05067 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
APPP05067 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
APPP05067 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.45■■□□□ 1.34
APPP05067 HTR7P1-201ENST00000538670 1336 ntBASIC23.45■■□□□ 1.34
APPP05067 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
APPP05067 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
APPP05067 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
APPP05067 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
APPP05067 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.45■■□□□ 1.34
APPP05067 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
APPP05067 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC23.45■■□□□ 1.34
APPP05067 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC23.45■■□□□ 1.34
APPP05067 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
APPP05067 Z99916.2-201ENST00000604037 246 ntBASIC23.45■■□□□ 1.34
APPP05067 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
APPP05067 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
APPP05067 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
APPP05067 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
APPP05067 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
APPP05067 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
APPP05067 TMEM179-206ENST00000616017 1645 ntBASIC23.44■■□□□ 1.34
APPP05067 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
APPP05067 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
APPP05067 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
APPP05067 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
APPP05067 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
APPP05067 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
APPP05067 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
APPP05067 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
APPP05067 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC23.44■■□□□ 1.34
APPP05067 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
APPP05067 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC23.44■■□□□ 1.34
APPP05067 TUBB8P6-201ENST00000436895 1288 ntBASIC23.44■■□□□ 1.34
APPP05067 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
APPP05067 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC23.44■■□□□ 1.34
APPP05067 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC23.44■■□□□ 1.34
APPP05067 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
APPP05067 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC23.44■■□□□ 1.34
APPP05067 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
APPP05067 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC23.44■■□□□ 1.34
APPP05067 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
APPP05067 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
APPP05067 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC23.44■■□□□ 1.34
APPP05067 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
APPP05067 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC23.44■■□□□ 1.34
APPP05067 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
APPP05067 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
APPP05067 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
APPP05067 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
APPP05067 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
APPP05067 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.43■■□□□ 1.34
APPP05067 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
APPP05067 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
APPP05067 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC23.43■■□□□ 1.34
APPP05067 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
APPP05067 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
APPP05067 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC23.43■■□□□ 1.34
APPP05067 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
APPP05067 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
APPP05067 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
APPP05067 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
APPP05067 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
APPP05067 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC23.43■■□□□ 1.34
APPP05067 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
APPP05067 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
APPP05067 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
APPP05067 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
APPP05067 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
APPP05067 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC23.42■■□□□ 1.34
APPP05067 MIR718-201ENST00000390190 70 ntBASIC23.42■■□□□ 1.34
APPP05067 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
APPP05067 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
APPP05067 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.42■■□□□ 1.34
APPP05067 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.42■■□□□ 1.34
APPP05067 KRT18P16-201ENST00000510337 1294 ntBASIC23.42■■□□□ 1.34
APPP05067 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC23.42■■□□□ 1.34
APPP05067 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.42■■□□□ 1.34
APPP05067 RARRES2P10-201ENST00000564312 460 ntBASIC23.42■■□□□ 1.34
APPP05067 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
APPP05067 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC23.42■■□□□ 1.34
APPP05067 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
APPP05067 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
APPP05067 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
APPP05067 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC23.42■■□□□ 1.34
APPP05067 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
APPP05067 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC23.42■■□□□ 1.34
APPP05067 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC23.42■■□□□ 1.34
APPP05067 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
APPP05067 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms