Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLDN1O95832 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
CLDN1O95832 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.38
CLDN1O95832 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.46■□□□□ 0.38
CLDN1O95832 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN1O95832 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CLDN1O95832 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN1O95832 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN1O95832 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CLDN1O95832 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN1O95832 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN1O95832 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN1O95832 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN1O95832 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN1O95832 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN1O95832 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN1O95832 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN1O95832 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN1O95832 HCG4P8-203ENST00000443049 980 ntBASIC17.45■□□□□ 0.38
CLDN1O95832 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN1O95832 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.45■□□□□ 0.38
CLDN1O95832 AC092647.4-201ENST00000457211 535 ntBASIC17.45■□□□□ 0.38
CLDN1O95832 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN1O95832 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN1O95832 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN1O95832 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.45■□□□□ 0.38
CLDN1O95832 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN1O95832 AL138966.2-201ENST00000621997 464 ntBASIC17.45■□□□□ 0.38
CLDN1O95832 AL121956.5-201ENST00000625261 221 ntBASIC17.45■□□□□ 0.38
CLDN1O95832 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.45■□□□□ 0.38
CLDN1O95832 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CLDN1O95832 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN1O95832 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.45■□□□□ 0.38
CLDN1O95832 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN1O95832 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN1O95832 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN1O95832 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN1O95832 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN1O95832 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CLDN1O95832 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN1O95832 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN1O95832 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN1O95832 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN1O95832 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CLDN1O95832 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN1O95832 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN1O95832 HMGA1P5-201ENST00000412453 271 ntBASIC17.44■□□□□ 0.38
CLDN1O95832 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.44■□□□□ 0.38
CLDN1O95832 B3GAT3P1-201ENST00000471720 806 ntBASIC17.44■□□□□ 0.38
CLDN1O95832 AC097488.1-201ENST00000507834 756 ntBASIC17.44■□□□□ 0.38
CLDN1O95832 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.44■□□□□ 0.38
CLDN1O95832 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.44■□□□□ 0.38
CLDN1O95832 DGCR10-201ENST00000609839 495 ntBASIC17.44■□□□□ 0.38
CLDN1O95832 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.44■□□□□ 0.38
CLDN1O95832 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN1O95832 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN1O95832 AF106564.1-201ENST00000607058 2553 ntBASIC17.44■□□□□ 0.38
CLDN1O95832 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDN1O95832 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN1O95832 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN1O95832 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN1O95832 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDN1O95832 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN1O95832 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN1O95832 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN1O95832 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
CLDN1O95832 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN1O95832 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN1O95832 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN1O95832 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN1O95832 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.43■□□□□ 0.38
CLDN1O95832 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN1O95832 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN1O95832 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN1O95832 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN1O95832 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN1O95832 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN1O95832 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.43■□□□□ 0.38
CLDN1O95832 AC026271.3-201ENST00000571884 352 ntBASIC17.43■□□□□ 0.38
CLDN1O95832 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN1O95832 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN1O95832 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN1O95832 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.43■□□□□ 0.38
CLDN1O95832 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.43■□□□□ 0.38
CLDN1O95832 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN1O95832 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN1O95832 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.43■□□□□ 0.38
CLDN1O95832 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN1O95832 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.43■□□□□ 0.38
CLDN1O95832 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
CLDN1O95832 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN1O95832 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN1O95832 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN1O95832 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN1O95832 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CLDN1O95832 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN1O95832 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CLDN1O95832 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN1O95832 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.42■□□□□ 0.38
CLDN1O95832 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms