Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.63■□□□□ 0.73
VAPBO95292 AC142086.2-201ENST00000569753 217 ntBASIC19.63■□□□□ 0.73
VAPBO95292 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.63■□□□□ 0.73
VAPBO95292 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
VAPBO95292 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VAPBO95292 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VAPBO95292 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
VAPBO95292 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
VAPBO95292 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VAPBO95292 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VAPBO95292 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
VAPBO95292 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VAPBO95292 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VAPBO95292 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VAPBO95292 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
VAPBO95292 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VAPBO95292 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VAPBO95292 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
VAPBO95292 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
VAPBO95292 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VAPBO95292 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.62■□□□□ 0.73
VAPBO95292 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VAPBO95292 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VAPBO95292 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.62■□□□□ 0.73
VAPBO95292 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VAPBO95292 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.62■□□□□ 0.73
VAPBO95292 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.62■□□□□ 0.73
VAPBO95292 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
VAPBO95292 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.62■□□□□ 0.73
VAPBO95292 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VAPBO95292 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
VAPBO95292 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VAPBO95292 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VAPBO95292 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
VAPBO95292 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VAPBO95292 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VAPBO95292 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.61■□□□□ 0.73
VAPBO95292 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VAPBO95292 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.61■□□□□ 0.73
VAPBO95292 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VAPBO95292 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
VAPBO95292 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VAPBO95292 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.61■□□□□ 0.73
VAPBO95292 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VAPBO95292 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.61■□□□□ 0.73
VAPBO95292 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
VAPBO95292 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.61■□□□□ 0.73
VAPBO95292 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.61■□□□□ 0.73
VAPBO95292 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.61■□□□□ 0.73
VAPBO95292 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
VAPBO95292 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.61■□□□□ 0.73
VAPBO95292 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VAPBO95292 AL032819.2-201ENST00000624543 2162 ntBASIC19.61■□□□□ 0.73
VAPBO95292 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VAPBO95292 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VAPBO95292 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VAPBO95292 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
VAPBO95292 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VAPBO95292 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VAPBO95292 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VAPBO95292 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
VAPBO95292 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VAPBO95292 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
VAPBO95292 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VAPBO95292 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VAPBO95292 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.6■□□□□ 0.73
VAPBO95292 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VAPBO95292 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VAPBO95292 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.6■□□□□ 0.73
VAPBO95292 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VAPBO95292 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VAPBO95292 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VAPBO95292 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VAPBO95292 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
VAPBO95292 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VAPBO95292 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VAPBO95292 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VAPBO95292 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VAPBO95292 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.6■□□□□ 0.73
VAPBO95292 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
VAPBO95292 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.6■□□□□ 0.73
VAPBO95292 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.6■□□□□ 0.73
VAPBO95292 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.6■□□□□ 0.73
VAPBO95292 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
VAPBO95292 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.6■□□□□ 0.73
VAPBO95292 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.6■□□□□ 0.73
VAPBO95292 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
VAPBO95292 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.6■□□□□ 0.73
VAPBO95292 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VAPBO95292 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
VAPBO95292 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.59■□□□□ 0.73
VAPBO95292 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
VAPBO95292 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VAPBO95292 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VAPBO95292 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
VAPBO95292 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
VAPBO95292 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VAPBO95292 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VAPBO95292 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
VAPBO95292 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms