Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPXO76031 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPXO76031 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPXO76031 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.7■□□□□ 0.42
CLPXO76031 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.7■□□□□ 0.42
CLPXO76031 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPXO76031 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPXO76031 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPXO76031 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.7■□□□□ 0.42
CLPXO76031 WIZP1-201ENST00000531444 2299 ntBASIC17.7■□□□□ 0.42
CLPXO76031 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CLPXO76031 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.7■□□□□ 0.42
CLPXO76031 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPXO76031 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.7■□□□□ 0.42
CLPXO76031 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.7■□□□□ 0.42
CLPXO76031 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPXO76031 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CLPXO76031 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.7■□□□□ 0.42
CLPXO76031 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPXO76031 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.69■□□□□ 0.42
CLPXO76031 AC106820.2-201ENST00000563775 3264 ntBASIC17.69■□□□□ 0.42
CLPXO76031 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.69■□□□□ 0.42
CLPXO76031 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLPXO76031 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.69■□□□□ 0.42
CLPXO76031 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLPXO76031 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLPXO76031 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLPXO76031 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLPXO76031 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.69■□□□□ 0.42
CLPXO76031 AC034268.1-201ENST00000441047 882 ntBASIC17.69■□□□□ 0.42
CLPXO76031 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.69■□□□□ 0.42
CLPXO76031 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.69■□□□□ 0.42
CLPXO76031 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.69■□□□□ 0.42
CLPXO76031 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLPXO76031 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLPXO76031 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CLPXO76031 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLPXO76031 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLPXO76031 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLPXO76031 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.69■□□□□ 0.42
CLPXO76031 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
CLPXO76031 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLPXO76031 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLPXO76031 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLPXO76031 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLPXO76031 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.68■□□□□ 0.42
CLPXO76031 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLPXO76031 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.68■□□□□ 0.42
CLPXO76031 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.68■□□□□ 0.42
CLPXO76031 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
CLPXO76031 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLPXO76031 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLPXO76031 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLPXO76031 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLPXO76031 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLPXO76031 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLPXO76031 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLPXO76031 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLPXO76031 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLPXO76031 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLPXO76031 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLPXO76031 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLPXO76031 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLPXO76031 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLPXO76031 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.68■□□□□ 0.42
CLPXO76031 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLPXO76031 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.68■□□□□ 0.42
CLPXO76031 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CLPXO76031 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.68■□□□□ 0.42
CLPXO76031 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.68■□□□□ 0.42
CLPXO76031 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLPXO76031 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.68■□□□□ 0.42
CLPXO76031 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLPXO76031 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.68■□□□□ 0.42
CLPXO76031 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CLPXO76031 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLPXO76031 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLPXO76031 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLPXO76031 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLPXO76031 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLPXO76031 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLPXO76031 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLPXO76031 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CLPXO76031 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLPXO76031 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.67■□□□□ 0.42
CLPXO76031 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLPXO76031 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
CLPXO76031 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CLPXO76031 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CLPXO76031 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CLPXO76031 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLPXO76031 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CLPXO76031 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLPXO76031 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.67■□□□□ 0.42
CLPXO76031 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLPXO76031 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.67■□□□□ 0.42
CLPXO76031 AC012414.1-201ENST00000556676 535 ntBASIC17.67■□□□□ 0.42
CLPXO76031 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CLPXO76031 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.67■□□□□ 0.42
CLPXO76031 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms