Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.86■□□□□ 0.77
RIPK2O43353 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK2O43353 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
RIPK2O43353 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.86■□□□□ 0.77
RIPK2O43353 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.86■□□□□ 0.77
RIPK2O43353 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK2O43353 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK2O43353 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.85■□□□□ 0.77
RIPK2O43353 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.85■□□□□ 0.77
RIPK2O43353 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.85■□□□□ 0.77
RIPK2O43353 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK2O43353 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK2O43353 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.85■□□□□ 0.77
RIPK2O43353 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK2O43353 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK2O43353 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK2O43353 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK2O43353 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK2O43353 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RIPK2O43353 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.85■□□□□ 0.77
RIPK2O43353 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK2O43353 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK2O43353 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.85■□□□□ 0.77
RIPK2O43353 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK2O43353 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.85■□□□□ 0.77
RIPK2O43353 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.85■□□□□ 0.77
RIPK2O43353 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.85■□□□□ 0.77
RIPK2O43353 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK2O43353 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK2O43353 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.85■□□□□ 0.77
RIPK2O43353 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK2O43353 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK2O43353 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK2O43353 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIPK2O43353 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIPK2O43353 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RIPK2O43353 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
RIPK2O43353 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIPK2O43353 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RIPK2O43353 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RIPK2O43353 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
RIPK2O43353 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIPK2O43353 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
RIPK2O43353 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIPK2O43353 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.84■□□□□ 0.77
RIPK2O43353 RARRES2P4-201ENST00000514074 484 ntBASIC19.84■□□□□ 0.77
RIPK2O43353 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RIPK2O43353 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RIPK2O43353 AC013268.1-206ENST00000638368 961 ntBASIC19.84■□□□□ 0.77
RIPK2O43353 AC112229.1-201ENST00000639295 961 ntBASIC19.84■□□□□ 0.77
RIPK2O43353 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RIPK2O43353 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.84■□□□□ 0.77
RIPK2O43353 AC135050.7-201ENST00000624508 2218 ntBASIC19.84■□□□□ 0.77
RIPK2O43353 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RIPK2O43353 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIPK2O43353 AC079598.2-202ENST00000546624 1451 ntBASIC19.84■□□□□ 0.77
RIPK2O43353 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
RIPK2O43353 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
RIPK2O43353 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIPK2O43353 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RIPK2O43353 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIPK2O43353 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.84■□□□□ 0.77
RIPK2O43353 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.84■□□□□ 0.77
RIPK2O43353 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RIPK2O43353 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIPK2O43353 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.84■□□□□ 0.77
RIPK2O43353 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.83■□□□□ 0.77
RIPK2O43353 AL390961.4-201ENST00000623958 2535 ntBASIC19.83■□□□□ 0.77
RIPK2O43353 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RIPK2O43353 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RIPK2O43353 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RIPK2O43353 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RIPK2O43353 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.83■□□□□ 0.77
RIPK2O43353 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.83■□□□□ 0.77
RIPK2O43353 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RIPK2O43353 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RIPK2O43353 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RIPK2O43353 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.83■□□□□ 0.77
RIPK2O43353 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
RIPK2O43353 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RIPK2O43353 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RIPK2O43353 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.83■□□□□ 0.77
RIPK2O43353 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RIPK2O43353 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RIPK2O43353 KRT18P68-201ENST00000392293 1000 ntBASIC19.83■□□□□ 0.77
RIPK2O43353 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RIPK2O43353 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
RIPK2O43353 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.83■□□□□ 0.77
RIPK2O43353 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RIPK2O43353 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RIPK2O43353 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
RIPK2O43353 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RIPK2O43353 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.83■□□□□ 0.76
RIPK2O43353 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RIPK2O43353 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.83■□□□□ 0.76
RIPK2O43353 AL031598.1-201ENST00000561511 1773 ntBASIC19.83■□□□□ 0.76
RIPK2O43353 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RIPK2O43353 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIPK2O43353 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RIPK2O43353 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms