Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
COPEO14579 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COPEO14579 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
COPEO14579 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.53■□□□□ 0.72
COPEO14579 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
COPEO14579 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COPEO14579 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
COPEO14579 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COPEO14579 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COPEO14579 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
COPEO14579 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
COPEO14579 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
COPEO14579 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COPEO14579 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
COPEO14579 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COPEO14579 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COPEO14579 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
COPEO14579 MIR638-201ENST00000385237 100 ntBASIC19.52■□□□□ 0.72
COPEO14579 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COPEO14579 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COPEO14579 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COPEO14579 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.52■□□□□ 0.72
COPEO14579 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COPEO14579 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
COPEO14579 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
COPEO14579 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.52■□□□□ 0.71
COPEO14579 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
COPEO14579 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COPEO14579 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
COPEO14579 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
COPEO14579 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.51■□□□□ 0.71
COPEO14579 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COPEO14579 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COPEO14579 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.51■□□□□ 0.71
COPEO14579 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
COPEO14579 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.51■□□□□ 0.71
COPEO14579 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COPEO14579 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.51■□□□□ 0.71
COPEO14579 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COPEO14579 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.51■□□□□ 0.71
COPEO14579 CROCCP3-202ENST00000420820 1947 ntBASIC19.51■□□□□ 0.71
COPEO14579 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COPEO14579 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COPEO14579 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COPEO14579 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COPEO14579 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.5■□□□□ 0.71
COPEO14579 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COPEO14579 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.5■□□□□ 0.71
COPEO14579 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COPEO14579 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COPEO14579 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
COPEO14579 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COPEO14579 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.5■□□□□ 0.71
COPEO14579 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.5■□□□□ 0.71
COPEO14579 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.5■□□□□ 0.71
COPEO14579 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
COPEO14579 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COPEO14579 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.5■□□□□ 0.71
COPEO14579 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
COPEO14579 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COPEO14579 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
COPEO14579 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
COPEO14579 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.5■□□□□ 0.71
COPEO14579 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.5■□□□□ 0.71
COPEO14579 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COPEO14579 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COPEO14579 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
COPEO14579 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.5■□□□□ 0.71
COPEO14579 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
COPEO14579 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COPEO14579 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.5■□□□□ 0.71
COPEO14579 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.5■□□□□ 0.71
COPEO14579 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COPEO14579 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COPEO14579 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
COPEO14579 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COPEO14579 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COPEO14579 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COPEO14579 AL161938.1-201ENST00000569833 2180 ntBASIC19.49■□□□□ 0.71
COPEO14579 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COPEO14579 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COPEO14579 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.49■□□□□ 0.71
COPEO14579 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.49■□□□□ 0.71
COPEO14579 KRT18P11-201ENST00000435214 1283 ntBASIC19.49■□□□□ 0.71
COPEO14579 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.49■□□□□ 0.71
COPEO14579 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.49■□□□□ 0.71
COPEO14579 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
COPEO14579 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COPEO14579 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
COPEO14579 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COPEO14579 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COPEO14579 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COPEO14579 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COPEO14579 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COPEO14579 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.49■□□□□ 0.71
COPEO14579 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.49■□□□□ 0.71
COPEO14579 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
COPEO14579 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
COPEO14579 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COPEO14579 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms