Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.73■□□□□ 0.59
CNOT1A5YKK6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT1A5YKK6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.73■□□□□ 0.59
CNOT1A5YKK6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.73■□□□□ 0.59
CNOT1A5YKK6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CNOT1A5YKK6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.73■□□□□ 0.59
CNOT1A5YKK6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.73■□□□□ 0.59
CNOT1A5YKK6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT1A5YKK6 AC016734.2-201ENST00000624325 1377 ntBASIC18.73■□□□□ 0.59
CNOT1A5YKK6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT1A5YKK6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT1A5YKK6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.73■□□□□ 0.59
CNOT1A5YKK6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.73■□□□□ 0.59
CNOT1A5YKK6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CNOT1A5YKK6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT1A5YKK6 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.73■□□□□ 0.59
CNOT1A5YKK6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
CNOT1A5YKK6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
CNOT1A5YKK6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.72■□□□□ 0.59
CNOT1A5YKK6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT1A5YKK6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.72■□□□□ 0.59
CNOT1A5YKK6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.72■□□□□ 0.59
CNOT1A5YKK6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT1A5YKK6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT1A5YKK6 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT1A5YKK6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.72■□□□□ 0.59
CNOT1A5YKK6 PMS2P1-201ENST00000431037 1228 ntBASIC18.72■□□□□ 0.59
CNOT1A5YKK6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT1A5YKK6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CNOT1A5YKK6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT1A5YKK6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CNOT1A5YKK6 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.72■□□□□ 0.59
CNOT1A5YKK6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT1A5YKK6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT1A5YKK6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT1A5YKK6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT1A5YKK6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CNOT1A5YKK6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT1A5YKK6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT1A5YKK6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT1A5YKK6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.71■□□□□ 0.59
CNOT1A5YKK6 AC092597.1-201ENST00000487352 616 ntBASIC18.71■□□□□ 0.59
CNOT1A5YKK6 GCSHP2-201ENST00000560971 527 ntBASIC18.71■□□□□ 0.59
CNOT1A5YKK6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
CNOT1A5YKK6 AL031008.1-201ENST00000619963 541 ntBASIC18.71■□□□□ 0.59
CNOT1A5YKK6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT1A5YKK6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT1A5YKK6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT1A5YKK6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT1A5YKK6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT1A5YKK6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT1A5YKK6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CNOT1A5YKK6 TSPY12P-201ENST00000421279 868 ntBASIC18.71■□□□□ 0.59
CNOT1A5YKK6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT1A5YKK6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.71■□□□□ 0.59
CNOT1A5YKK6 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.71■□□□□ 0.59
CNOT1A5YKK6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT1A5YKK6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.71■□□□□ 0.59
CNOT1A5YKK6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT1A5YKK6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 AC012615.1-201ENST00000565797 1299 ntBASIC18.7■□□□□ 0.58
CNOT1A5YKK6 BX640515.1-201ENST00000617215 977 ntBASIC18.7■□□□□ 0.58
CNOT1A5YKK6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 HLA-A-201ENST00000376802 1334 ntBASIC18.7■□□□□ 0.58
CNOT1A5YKK6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 KRT18P13-201ENST00000400056 1290 ntBASIC18.7■□□□□ 0.58
CNOT1A5YKK6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 TSPY19P-201ENST00000418461 509 ntBASIC18.7■□□□□ 0.58
CNOT1A5YKK6 TSPY18P-201ENST00000441642 509 ntBASIC18.7■□□□□ 0.58
CNOT1A5YKK6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.7■□□□□ 0.58
CNOT1A5YKK6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.69■□□□□ 0.58
CNOT1A5YKK6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.69■□□□□ 0.58
CNOT1A5YKK6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT1A5YKK6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT1A5YKK6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT1A5YKK6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms