Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC087289.5-201ENST00000586076 3175 ntBASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TCRBV4S1A1TA0A5B7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
TCRBV4S1A1TA0A5B7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
TCRBV4S1A1TA0A5B7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TCRBV4S1A1TA0A5B7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.1
TCRBV4S1A1TA0A5B7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TCRBV4S1A1TA0A5B7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV4S1A1TA0A5B7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV4S1A1TA0A5B7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms