Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM28A0A1B0GU29 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM28A0A1B0GU29 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.01■□□□□ 0.95
SMIM28A0A1B0GU29 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM28A0A1B0GU29 AC012306.2-201ENST00000609350 630 ntBASIC21.01■□□□□ 0.95
SMIM28A0A1B0GU29 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM28A0A1B0GU29 KRT8P9-201ENST00000558927 1449 ntBASIC21.01■□□□□ 0.95
SMIM28A0A1B0GU29 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM28A0A1B0GU29 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.01■□□□□ 0.95
SMIM28A0A1B0GU29 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM28A0A1B0GU29 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM28A0A1B0GU29 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMIM28A0A1B0GU29 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21■□□□□ 0.95
SMIM28A0A1B0GU29 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SMIM28A0A1B0GU29 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMIM28A0A1B0GU29 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SMIM28A0A1B0GU29 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMIM28A0A1B0GU29 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMIM28A0A1B0GU29 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21■□□□□ 0.95
SMIM28A0A1B0GU29 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SMIM28A0A1B0GU29 FITM1-202ENST00000559294 800 ntBASIC21■□□□□ 0.95
SMIM28A0A1B0GU29 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21■□□□□ 0.95
SMIM28A0A1B0GU29 AC130371.2-201ENST00000619443 611 ntBASIC21■□□□□ 0.95
SMIM28A0A1B0GU29 AC097493.4-201ENST00000641197 219 ntBASIC21■□□□□ 0.95
SMIM28A0A1B0GU29 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SMIM28A0A1B0GU29 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SMIM28A0A1B0GU29 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21■□□□□ 0.95
SMIM28A0A1B0GU29 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
SMIM28A0A1B0GU29 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMIM28A0A1B0GU29 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMIM28A0A1B0GU29 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM28A0A1B0GU29 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM28A0A1B0GU29 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM28A0A1B0GU29 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SMIM28A0A1B0GU29 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM28A0A1B0GU29 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM28A0A1B0GU29 RCC2P6-201ENST00000526625 1557 ntBASIC20.99■□□□□ 0.95
SMIM28A0A1B0GU29 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM28A0A1B0GU29 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM28A0A1B0GU29 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM28A0A1B0GU29 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM28A0A1B0GU29 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SMIM28A0A1B0GU29 AL390955.1-201ENST00000428694 934 ntBASIC20.99■□□□□ 0.95
SMIM28A0A1B0GU29 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
SMIM28A0A1B0GU29 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.99■□□□□ 0.95
SMIM28A0A1B0GU29 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.99■□□□□ 0.95
SMIM28A0A1B0GU29 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.99■□□□□ 0.95
SMIM28A0A1B0GU29 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.99■□□□□ 0.95
SMIM28A0A1B0GU29 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.99■□□□□ 0.95
SMIM28A0A1B0GU29 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.99■□□□□ 0.95
SMIM28A0A1B0GU29 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.99■□□□□ 0.95
SMIM28A0A1B0GU29 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM28A0A1B0GU29 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
SMIM28A0A1B0GU29 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM28A0A1B0GU29 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.99■□□□□ 0.95
SMIM28A0A1B0GU29 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM28A0A1B0GU29 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM28A0A1B0GU29 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.98■□□□□ 0.95
SMIM28A0A1B0GU29 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM28A0A1B0GU29 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SMIM28A0A1B0GU29 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SMIM28A0A1B0GU29 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM28A0A1B0GU29 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.98■□□□□ 0.95
SMIM28A0A1B0GU29 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM28A0A1B0GU29 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM28A0A1B0GU29 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM28A0A1B0GU29 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.98■□□□□ 0.95
SMIM28A0A1B0GU29 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.98■□□□□ 0.95
SMIM28A0A1B0GU29 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.98■□□□□ 0.95
SMIM28A0A1B0GU29 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.98■□□□□ 0.95
SMIM28A0A1B0GU29 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM28A0A1B0GU29 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.98■□□□□ 0.95
SMIM28A0A1B0GU29 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.98■□□□□ 0.95
SMIM28A0A1B0GU29 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
SMIM28A0A1B0GU29 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM28A0A1B0GU29 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SMIM28A0A1B0GU29 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.98■□□□□ 0.95
SMIM28A0A1B0GU29 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM28A0A1B0GU29 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SMIM28A0A1B0GU29 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM28A0A1B0GU29 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM28A0A1B0GU29 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.97■□□□□ 0.95
SMIM28A0A1B0GU29 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.97■□□□□ 0.95
SMIM28A0A1B0GU29 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.97■□□□□ 0.95
SMIM28A0A1B0GU29 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM28A0A1B0GU29 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM28A0A1B0GU29 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM28A0A1B0GU29 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM28A0A1B0GU29 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.97■□□□□ 0.95
SMIM28A0A1B0GU29 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM28A0A1B0GU29 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.97■□□□□ 0.95
SMIM28A0A1B0GU29 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.97■□□□□ 0.95
SMIM28A0A1B0GU29 AC008040.2-201ENST00000461049 708 ntBASIC20.97■□□□□ 0.95
SMIM28A0A1B0GU29 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.97■□□□□ 0.95
SMIM28A0A1B0GU29 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.97■□□□□ 0.95
SMIM28A0A1B0GU29 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.97■□□□□ 0.95
SMIM28A0A1B0GU29 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.97■□□□□ 0.95
SMIM28A0A1B0GU29 LINC01465-201ENST00000408887 1940 ntBASIC20.97■□□□□ 0.95
SMIM28A0A1B0GU29 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM28A0A1B0GU29 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms