Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAV27A0A087WT01 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV27A0A087WT01 MIPEPP3-201ENST00000412105 444 ntBASIC17.71■□□□□ 0.43
TRAV27A0A087WT01 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV27A0A087WT01 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV27A0A087WT01 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.71■□□□□ 0.43
TRAV27A0A087WT01 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV27A0A087WT01 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV27A0A087WT01 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAV27A0A087WT01 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV27A0A087WT01 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV27A0A087WT01 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV27A0A087WT01 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV27A0A087WT01 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRAV27A0A087WT01 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV27A0A087WT01 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAV27A0A087WT01 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRAV27A0A087WT01 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAV27A0A087WT01 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV27A0A087WT01 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV27A0A087WT01 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV27A0A087WT01 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV27A0A087WT01 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TRAV27A0A087WT01 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRAV27A0A087WT01 AL390719.1-204ENST00000412397 1219 ntBASIC17.7■□□□□ 0.42
TRAV27A0A087WT01 DUSP5P2-201ENST00000426873 1033 ntBASIC17.7■□□□□ 0.42
TRAV27A0A087WT01 AC006970.2-201ENST00000450065 779 ntBASIC17.7■□□□□ 0.42
TRAV27A0A087WT01 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAV27A0A087WT01 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAV27A0A087WT01 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV27A0A087WT01 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
TRAV27A0A087WT01 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRAV27A0A087WT01 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV27A0A087WT01 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.7■□□□□ 0.42
TRAV27A0A087WT01 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV27A0A087WT01 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.7■□□□□ 0.42
TRAV27A0A087WT01 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV27A0A087WT01 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
TRAV27A0A087WT01 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV27A0A087WT01 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAV27A0A087WT01 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 AC083906.2-201ENST00000511578 360 ntBASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 AL121832.2-201ENST00000610979 668 ntBASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAV27A0A087WT01 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV27A0A087WT01 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRAV27A0A087WT01 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV27A0A087WT01 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV27A0A087WT01 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV27A0A087WT01 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAV27A0A087WT01 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV27A0A087WT01 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV27A0A087WT01 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAV27A0A087WT01 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TRAV27A0A087WT01 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAV27A0A087WT01 AC005829.2-201ENST00000571422 1056 ntBASIC17.68■□□□□ 0.42
TRAV27A0A087WT01 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAV27A0A087WT01 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAV27A0A087WT01 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV27A0A087WT01 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV27A0A087WT01 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAV27A0A087WT01 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TRAV27A0A087WT01 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV27A0A087WT01 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
TRAV27A0A087WT01 AC124283.5-201ENST00000624661 1809 ntBASIC17.68■□□□□ 0.42
TRAV27A0A087WT01 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 TFP1-202ENST00000475455 1573 ntBASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms