Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DPA1P20036 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
HLA-DPA1P20036 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DPA1P20036 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DPA1P20036 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
HLA-DPA1P20036 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HLA-DPA1P20036 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DPA1P20036 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 AC009804.1-201ENST00000400949 179 ntBASIC5.37□□□□□ -1.55
HLA-DPA1P20036 AL391361.1-201ENST00000405580 489 ntBASIC5.37□□□□□ -1.55
HLA-DPA1P20036 RN7SKP59-201ENST00000410520 314 ntBASIC5.37□□□□□ -1.55
HLA-DPA1P20036 RNA5SP296-201ENST00000410523 111 ntBASIC5.37□□□□□ -1.55
HLA-DPA1P20036 AL390774.1-201ENST00000411924 246 ntBASIC5.37□□□□□ -1.55
HLA-DPA1P20036 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 AL133325.1-201ENST00000421090 382 ntBASIC5.37□□□□□ -1.55
HLA-DPA1P20036 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 AC021205.1-201ENST00000468797 348 ntBASIC5.37□□□□□ -1.55
HLA-DPA1P20036 AC058823.1-201ENST00000485315 474 ntBASIC5.37□□□□□ -1.55
HLA-DPA1P20036 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 RPEP1-201ENST00000504507 658 ntBASIC5.37□□□□□ -1.55
HLA-DPA1P20036 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 AC098976.1-201ENST00000513014 541 ntBASIC5.37□□□□□ -1.55
HLA-DPA1P20036 BX510359.5-201ENST00000515651 304 ntBASIC5.37□□□□□ -1.55
HLA-DPA1P20036 SCARNA21.2-201ENST00000516600 166 ntBASIC5.37□□□□□ -1.55
HLA-DPA1P20036 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 IGKV2-18-201ENST00000522607 343 ntBASIC5.37□□□□□ -1.55
HLA-DPA1P20036 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.37□□□□□ -1.55
HLA-DPA1P20036 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 AC022387.2-201ENST00000604050 448 ntBASIC5.37□□□□□ -1.55
HLA-DPA1P20036 AC007204.2-201ENST00000615022 616 ntBASIC5.37□□□□□ -1.55
HLA-DPA1P20036 AC005840.5-201ENST00000619166 599 ntBASIC5.37□□□□□ -1.55
HLA-DPA1P20036 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 AP002967.1-201ENST00000624203 539 ntBASIC5.37□□□□□ -1.55
HLA-DPA1P20036 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 AP001029.2-203ENST00000589795 4910 ntBASIC5.37□□□□□ -1.55
HLA-DPA1P20036 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HLA-DPA1P20036 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 OR1L6-202ENST00000373684 1044 ntBASIC5.36□□□□□ -1.55
HLA-DPA1P20036 RNU1-77P-201ENST00000390868 162 ntBASIC5.36□□□□□ -1.55
HLA-DPA1P20036 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 VDAC2P1-201ENST00000399358 958 ntBASIC5.36□□□□□ -1.55
HLA-DPA1P20036 PEX12P1-201ENST00000400284 1048 ntBASIC5.36□□□□□ -1.55
HLA-DPA1P20036 NPM1P4-201ENST00000414095 812 ntBASIC5.36□□□□□ -1.55
HLA-DPA1P20036 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 AL691447.1-201ENST00000419456 387 ntBASIC5.36□□□□□ -1.55
HLA-DPA1P20036 RFESDP1-201ENST00000422350 461 ntBASIC5.36□□□□□ -1.55
HLA-DPA1P20036 CYCSP6-201ENST00000434498 302 ntBASIC5.36□□□□□ -1.55
HLA-DPA1P20036 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.36□□□□□ -1.55
HLA-DPA1P20036 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 AL591623.2-201ENST00000449978 222 ntBASIC5.36□□□□□ -1.55
HLA-DPA1P20036 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms