RNA–Protein interactions for RNA: ENST00000546248.5

TRDN-205, Transcript of triadin, humanhuman

TSL 1 (best) BASIC

Gene TRDN, Length 1,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRDN-205ENST00000546248 AEBP2Q6ZN18 517 aaPredicted RBP28.02■■■□□ 2.08
TRDN-205ENST00000546248 CHIC1Q5VXU3 224 aa26.66■■□□□ 1.86
TRDN-205ENST00000546248 SENP3Q9H4L4 574 aaPredicted RBP23.79■■□□□ 1.4
TRDN-205ENST00000546248 PHF23Q9BUL5 403 aaPredicted RBP23.54■■□□□ 1.36
TRDN-205ENST00000546248 FOXD1Q16676 465 aa22.22■■□□□ 1.15
TRDN-205ENST00000546248 PLPPR3Q6T4P5 718 aa21.32■■□□□ 1
TRDN-205ENST00000546248 PPP6R1Q9UPN7 881 aa20.89■□□□□ 0.93
TRDN-205ENST00000546248 ADRA2BP18089 450 aa20.82■□□□□ 0.92
TRDN-205ENST00000546248 POTEDQ86YR6 584 aa20.82■□□□□ 0.92
TRDN-205ENST00000546248 PIAS4Q8N2W9 510 aaPredicted RBP20.76■□□□□ 0.91
TRDN-205ENST00000546248 MSH5O43196 834 aa20.68■□□□□ 0.9
TRDN-205ENST00000546248 MAPK8IP2Q13387 824 aaPredicted RBP19.1■□□□□ 0.65
TRDN-205ENST00000546248 SCAF1Q9H7N4 1312 aaKnown RBP18.94■□□□□ 0.62
TRDN-205ENST00000546248 DMRT2Q9Y5R5 561 aa18.91■□□□□ 0.62
TRDN-205ENST00000546248 PPP4R3CPQ6ZMV5 832 aa18.73■□□□□ 0.59
TRDN-205ENST00000546248 CNKSR2Q8WXI2 1034 aa18.33■□□□□ 0.52
TRDN-205ENST00000546248 HOXD11P31277 338 aaPredicted RBP18.26■□□□□ 0.51
TRDN-205ENST00000546248 RNF216Q9NWF9 866 aaPredicted RBP18.14■□□□□ 0.49
TRDN-205ENST00000546248 DCAF8L1A6NGE4 600 aa18.12■□□□□ 0.49
TRDN-205ENST00000546248 NCBP3Q53F19 620 aaKnown RBP17.99■□□□□ 0.47
TRDN-205ENST00000546248 NPM3O75607 178 aaKnown RBP17.8■□□□□ 0.44
TRDN-205ENST00000546248 CACNB1Q02641 598 aaPredicted RBP17.7■□□□□ 0.42
TRDN-205ENST00000546248 RNF39Q9H2S5 420 aa17.7■□□□□ 0.42
TRDN-205ENST00000546248 KCNA4P22459 653 aa17.57■□□□□ 0.4
TRDN-205ENST00000546248 DNAJC5BQ9UF47 199 aa17.56■□□□□ 0.4
TRDN-205ENST00000546248 C1QBPQ07021 282 aaKnown RBP17.41■□□□□ 0.38
TRDN-205ENST00000546248 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.38■□□□□ 0.37
TRDN-205ENST00000546248 U3KPZ7 1027 aaPredicted RBP17.07■□□□□ 0.32
TRDN-205ENST00000546248 SLC4A2P04920 1241 aa16.99■□□□□ 0.31
TRDN-205ENST00000546248 SPINK5Q9NQ38 1064 aaPredicted RBP16.8■□□□□ 0.28
TRDN-205ENST00000546248 CAPN15O75808 1086 aa16.73■□□□□ 0.27
TRDN-205ENST00000546248 DSG3P32926 999 aa16.62■□□□□ 0.25
TRDN-205ENST00000546248 SLC4A1APQ9BWU0 796 aaKnown RBP16.57■□□□□ 0.24
TRDN-205ENST00000546248 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.53■□□□□ 0.24
TRDN-205ENST00000546248 HNRNPUL2Q1KMD3 747 aaKnown RBP16.53■□□□□ 0.24
TRDN-205ENST00000546248 APLP2Q06481 763 aa16.5■□□□□ 0.23
TRDN-205ENST00000546248 TRHP20396 242 aaPredicted RBP16.49■□□□□ 0.23
TRDN-205ENST00000546248 SAMD1Q6SPF0 538 aaPredicted RBP16.46■□□□□ 0.23
TRDN-205ENST00000546248 ZNF219Q9P2Y4 722 aaPredicted RBP16.43■□□□□ 0.22
TRDN-205ENST00000546248 MYCNP04198 464 aaPredicted RBP16.42■□□□□ 0.22
TRDN-205ENST00000546248 ABCB7O75027 752 aa16.38■□□□□ 0.21
TRDN-205ENST00000546248 FOXD4L1Q9NU39 408 aa16.32■□□□□ 0.2
TRDN-205ENST00000546248 ZBTB22O15209 634 aa16.19■□□□□ 0.18
TRDN-205ENST00000546248 POTEHQ6S545 545 aa16.15■□□□□ 0.18
TRDN-205ENST00000546248 ATF5Q9Y2D1 282 aaPredicted RBP16.11■□□□□ 0.17
TRDN-205ENST00000546248 POLA2Q14181 598 aa16.07■□□□□ 0.16
TRDN-205ENST00000546248 RBM42Q9BTD8 480 aaKnown RBP15.79■□□□□ 0.12
TRDN-205ENST00000546248 ATXN8OSP0DMR3 200 aa15.78■□□□□ 0.12
TRDN-205ENST00000546248 ZBTB12Q9Y330 459 aaPredicted RBP15.69■□□□□ 0.1
TRDN-205ENST00000546248 OSCARQ8IYS5 282 aa15.58■□□□□ 0.08
TRDN-205ENST00000546248 CSRNP3Q8WYN3 585 aa15.52■□□□□ 0.08
TRDN-205ENST00000546248 AKT1S1Q96B36 256 aa15.48■□□□□ 0.07
TRDN-205ENST00000546248 CHRDL2Q6WN34 429 aa15.44■□□□□ 0.06
TRDN-205ENST00000546248 FBLN2P98095 1184 aa15.37■□□□□ 0.05
TRDN-205ENST00000546248 MKRN4PQ13434 485 aaPredicted RBP15.37■□□□□ 0.05
TRDN-205ENST00000546248 EHMT2Q96KQ7 1210 aa15.37■□□□□ 0.05
TRDN-205ENST00000546248 REM2Q8IYK8 340 aaPredicted RBP15.36■□□□□ 0.05
TRDN-205ENST00000546248 SPDYE2BA6NHP3 402 aa15.25■□□□□ 0.03
TRDN-205ENST00000546248 SPDYE6P0CI01 402 aa15.25■□□□□ 0.03
TRDN-205ENST00000546248 SPDYE2Q495Y8 402 aa15.25■□□□□ 0.03
TRDN-205ENST00000546248 PITPNM1O00562 1244 aa15.21■□□□□ 0.03
TRDN-205ENST00000546248 PIP4P2Q8N4L2 257 aa15.13■□□□□ 0.01
TRDN-205ENST00000546248 ZNF692Q9BU19 519 aaPredicted RBP15.1■□□□□ 0.01
TRDN-205ENST00000546248 SSUH2Q9Y2M2 353 aa15.09■□□□□ 0.01
TRDN-205ENST00000546248 FXR2P51116 673 aaKnown RBP eCLIP15.04■□□□□ -0
TRDN-205ENST00000546248 SPDYE1Q8NFV5 336 aaPredicted RBP14.95□□□□□ -0.02
TRDN-205ENST00000546248 CLEC11AQ9Y240 323 aa14.95□□□□□ -0.02
TRDN-205ENST00000546248 PABPN1Q86U42 306 aaKnown RBP eCLIP14.89□□□□□ -0.03
TRDN-205ENST00000546248 PRKAR2AP13861 404 aaKnown RBP14.8□□□□□ -0.04
TRDN-205ENST00000546248 HAX1O00165 279 aa14.79□□□□□ -0.04
TRDN-205ENST00000546248 SP7Q8TDD2 431 aaPredicted RBP14.79□□□□□ -0.04
TRDN-205ENST00000546248 PRR29P0C7W0 189 aa14.7□□□□□ -0.06
TRDN-205ENST00000546248 EVX2Q03828 476 aa14.7□□□□□ -0.06
TRDN-205ENST00000546248 CHADLQ6NUI6 762 aa14.7□□□□□ -0.06
TRDN-205ENST00000546248 SPDYE4A6NLX3 237 aa14.65□□□□□ -0.06
TRDN-205ENST00000546248 C19orf67A6NJJ6 358 aa14.56□□□□□ -0.08
TRDN-205ENST00000546248 STAG3Q9UJ98 1225 aa14.46□□□□□ -0.09
TRDN-205ENST00000546248 FARP1Q9Y4F1 1045 aaPredicted RBP14.45□□□□□ -0.1
TRDN-205ENST00000546248 CREBZFQ9NS37 354 aa14.41□□□□□ -0.1
TRDN-205ENST00000546248 CD44P16070 742 aaKnown RBP14.34□□□□□ -0.11
TRDN-205ENST00000546248 GABBR2O75899 941 aa14.33□□□□□ -0.12
TRDN-205ENST00000546248 PROM2Q8N271 834 aa14.33□□□□□ -0.12
TRDN-205ENST00000546248 MNX1P50219 401 aaPredicted RBP14.19□□□□□ -0.14
TRDN-205ENST00000546248 ZRANB1Q9UGI0 708 aa14.15□□□□□ -0.14
TRDN-205ENST00000546248 ZNF579Q8NAF0 562 aaKnown RBP14.12□□□□□ -0.15
TRDN-205ENST00000546248 NPM1P06748 294 aaKnown RBP eCLIP14.07□□□□□ -0.16
TRDN-205ENST00000546248 POTEIP0CG38 1075 aa14.07□□□□□ -0.16
TRDN-205ENST00000546248 FKBP8Q14318 412 aa14.05□□□□□ -0.16
TRDN-205ENST00000546248 CLCN6P51797 869 aa14.03□□□□□ -0.16
TRDN-205ENST00000546248 PAK3O75914 559 aaPredicted RBP14□□□□□ -0.17
TRDN-205ENST00000546248 PHF12Q96QT6 1004 aa13.99□□□□□ -0.17
TRDN-205ENST00000546248 GALR2O43603 387 aaPredicted RBP13.97□□□□□ -0.17
TRDN-205ENST00000546248 MIER1Q8N108 512 aa13.95□□□□□ -0.18
TRDN-205ENST00000546248 DCBLD2Q96PD2 775 aa13.91□□□□□ -0.18
TRDN-205ENST00000546248 TSPYL2Q9H2G4 693 aaPredicted RBP13.88□□□□□ -0.19
TRDN-205ENST00000546248 LHX8Q68G74 356 aa13.87□□□□□ -0.19
TRDN-205ENST00000546248 PLEKHG5O94827 1062 aa13.86□□□□□ -0.19
TRDN-205ENST00000546248 PLCD3Q8N3E9 789 aa13.84□□□□□ -0.19
TRDN-205ENST00000546248 CCDC61Q9Y6R9 512 aa13.82□□□□□ -0.2
TRDN-205ENST00000546248 RASEFQ8IZ41 740 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms