RNA–Protein interactions for RNA: ENST00000452675.1

LINC02541-202, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 5 BASIC

Gene LINC02541, Length 465 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-202ENST00000452675 AEBP2Q6ZN18 517 aaPredicted RBP25.08■■□□□ 1.61
LINC02541-202ENST00000452675 CHIC1Q5VXU3 224 aa24.19■■□□□ 1.46
LINC02541-202ENST00000452675 SENP3Q9H4L4 574 aaPredicted RBP21.32■■□□□ 1
LINC02541-202ENST00000452675 PHF23Q9BUL5 403 aaPredicted RBP21.25■□□□□ 0.99
LINC02541-202ENST00000452675 FOXD1Q16676 465 aa19.82■□□□□ 0.76
LINC02541-202ENST00000452675 PLPPR3Q6T4P5 718 aa19.5■□□□□ 0.71
LINC02541-202ENST00000452675 PPP6R1Q9UPN7 881 aa18.84■□□□□ 0.61
LINC02541-202ENST00000452675 ADRA2BP18089 450 aa18.8■□□□□ 0.6
LINC02541-202ENST00000452675 PIAS4Q8N2W9 510 aaPredicted RBP18.62■□□□□ 0.57
LINC02541-202ENST00000452675 MSH5O43196 834 aa18.4■□□□□ 0.54
LINC02541-202ENST00000452675 POTEDQ86YR6 584 aa17.29■□□□□ 0.36
LINC02541-202ENST00000452675 SCAF1Q9H7N4 1312 aaKnown RBP17.2■□□□□ 0.34
LINC02541-202ENST00000452675 MAPK8IP2Q13387 824 aaPredicted RBP17.15■□□□□ 0.34
LINC02541-202ENST00000452675 PPP4R3CPQ6ZMV5 832 aa17.15■□□□□ 0.34
LINC02541-202ENST00000452675 DMRT2Q9Y5R5 561 aa16.97■□□□□ 0.31
LINC02541-202ENST00000452675 CNKSR2Q8WXI2 1034 aa16.74■□□□□ 0.27
LINC02541-202ENST00000452675 NCBP3Q53F19 620 aaKnown RBP16.61■□□□□ 0.25
LINC02541-202ENST00000452675 HOXD11P31277 338 aaPredicted RBP16.5■□□□□ 0.23
LINC02541-202ENST00000452675 RNF216Q9NWF9 866 aaPredicted RBP16.49■□□□□ 0.23
LINC02541-202ENST00000452675 KCNA4P22459 653 aa16.41■□□□□ 0.22
LINC02541-202ENST00000452675 NPM3O75607 178 aaKnown RBP16.38■□□□□ 0.21
LINC02541-202ENST00000452675 DCAF8L1A6NGE4 600 aa16.24■□□□□ 0.19
LINC02541-202ENST00000452675 DNAJC5BQ9UF47 199 aa15.95■□□□□ 0.14
LINC02541-202ENST00000452675 RNF39Q9H2S5 420 aa15.74■□□□□ 0.11
LINC02541-202ENST00000452675 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.72■□□□□ 0.11
LINC02541-202ENST00000452675 SLC4A1APQ9BWU0 796 aaKnown RBP15.57■□□□□ 0.08
LINC02541-202ENST00000452675 SLC4A2P04920 1241 aa15.54■□□□□ 0.08
LINC02541-202ENST00000452675 CACNB1Q02641 598 aaPredicted RBP15.54■□□□□ 0.08
LINC02541-202ENST00000452675 C1QBPQ07021 282 aaKnown RBP15.53■□□□□ 0.08
LINC02541-202ENST00000452675 U3KPZ7 1027 aaPredicted RBP15.44■□□□□ 0.06
LINC02541-202ENST00000452675 FOXD4L1Q9NU39 408 aa15.19■□□□□ 0.02
LINC02541-202ENST00000452675 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.13■□□□□ 0.01
LINC02541-202ENST00000452675 MYCNP04198 464 aaPredicted RBP15.13■□□□□ 0.01
LINC02541-202ENST00000452675 HNRNPUL2Q1KMD3 747 aaKnown RBP15.13■□□□□ 0.01
LINC02541-202ENST00000452675 ZBTB22O15209 634 aa15.1■□□□□ 0.01
LINC02541-202ENST00000452675 SPINK5Q9NQ38 1064 aaPredicted RBP15.1■□□□□ 0.01
LINC02541-202ENST00000452675 SAMD1Q6SPF0 538 aaPredicted RBP15.06■□□□□ 0
LINC02541-202ENST00000452675 CAPN15O75808 1086 aa15.04■□□□□ -0
LINC02541-202ENST00000452675 APLP2Q06481 763 aa15.04■□□□□ -0
LINC02541-202ENST00000452675 TRHP20396 242 aaPredicted RBP14.9□□□□□ -0.02
LINC02541-202ENST00000452675 ZNF219Q9P2Y4 722 aaPredicted RBP14.89□□□□□ -0.03
LINC02541-202ENST00000452675 DSG3P32926 999 aa14.88□□□□□ -0.03
LINC02541-202ENST00000452675 EHMT2Q96KQ7 1210 aa14.77□□□□□ -0.05
LINC02541-202ENST00000452675 CSRNP3Q8WYN3 585 aa14.76□□□□□ -0.05
LINC02541-202ENST00000452675 ATF5Q9Y2D1 282 aaPredicted RBP14.76□□□□□ -0.05
LINC02541-202ENST00000452675 ABCB7O75027 752 aa14.74□□□□□ -0.05
LINC02541-202ENST00000452675 ATXN8OSP0DMR3 200 aa14.69□□□□□ -0.06
LINC02541-202ENST00000452675 POLA2Q14181 598 aa14.59□□□□□ -0.07
LINC02541-202ENST00000452675 NISCHQ9Y2I1 1504 aa14.54□□□□□ -0.08
LINC02541-202ENST00000452675 ZBTB12Q9Y330 459 aaPredicted RBP14.33□□□□□ -0.12
LINC02541-202ENST00000452675 RBM42Q9BTD8 480 aaKnown RBP14.18□□□□□ -0.14
LINC02541-202ENST00000452675 FBLN2P98095 1184 aa14.15□□□□□ -0.14
LINC02541-202ENST00000452675 OSCARQ8IYS5 282 aa14.12□□□□□ -0.15
LINC02541-202ENST00000452675 MKRN4PQ13434 485 aaPredicted RBP14.1□□□□□ -0.15
LINC02541-202ENST00000452675 AKT1S1Q96B36 256 aa13.94□□□□□ -0.18
LINC02541-202ENST00000452675 SPDYE2BA6NHP3 402 aa13.93□□□□□ -0.18
LINC02541-202ENST00000452675 SPDYE6P0CI01 402 aa13.93□□□□□ -0.18
LINC02541-202ENST00000452675 SPDYE2Q495Y8 402 aa13.93□□□□□ -0.18
LINC02541-202ENST00000452675 REM2Q8IYK8 340 aaPredicted RBP13.81□□□□□ -0.2
LINC02541-202ENST00000452675 ZNF692Q9BU19 519 aaPredicted RBP13.81□□□□□ -0.2
LINC02541-202ENST00000452675 SSUH2Q9Y2M2 353 aa13.79□□□□□ -0.2
LINC02541-202ENST00000452675 CHRDL2Q6WN34 429 aa13.71□□□□□ -0.21
LINC02541-202ENST00000452675 PITPNM1O00562 1244 aa13.66□□□□□ -0.22
LINC02541-202ENST00000452675 SPDYE4A6NLX3 237 aa13.63□□□□□ -0.23
LINC02541-202ENST00000452675 POTEHQ6S545 545 aa13.63□□□□□ -0.23
LINC02541-202ENST00000452675 PABPN1Q86U42 306 aaKnown RBP eCLIP13.63□□□□□ -0.23
LINC02541-202ENST00000452675 SPDYE1Q8NFV5 336 aaPredicted RBP13.58□□□□□ -0.24
LINC02541-202ENST00000452675 CLEC11AQ9Y240 323 aa13.53□□□□□ -0.24
LINC02541-202ENST00000452675 PIP4P2Q8N4L2 257 aa13.47□□□□□ -0.25
LINC02541-202ENST00000452675 FXR2P51116 673 aaKnown RBP eCLIP13.46□□□□□ -0.25
LINC02541-202ENST00000452675 PROM2Q8N271 834 aa13.38□□□□□ -0.27
LINC02541-202ENST00000452675 PRR29P0C7W0 189 aa13.37□□□□□ -0.27
LINC02541-202ENST00000452675 FKBP8Q14318 412 aa13.36□□□□□ -0.27
LINC02541-202ENST00000452675 STAG3Q9UJ98 1225 aa13.34□□□□□ -0.27
LINC02541-202ENST00000452675 PRKAR2AP13861 404 aaKnown RBP13.3□□□□□ -0.28
LINC02541-202ENST00000452675 CHADLQ6NUI6 762 aa13.24□□□□□ -0.29
LINC02541-202ENST00000452675 ABCC9O60706 1549 aa13.19□□□□□ -0.3
LINC02541-202ENST00000452675 CREBZFQ9NS37 354 aa13.14□□□□□ -0.31
LINC02541-202ENST00000452675 CCDC180Q9P1Z9 1646 aa13.13□□□□□ -0.31
LINC02541-202ENST00000452675 HAX1O00165 279 aa13.11□□□□□ -0.31
LINC02541-202ENST00000452675 FARP1Q9Y4F1 1045 aaPredicted RBP13.08□□□□□ -0.32
LINC02541-202ENST00000452675 C19orf67A6NJJ6 358 aa13.02□□□□□ -0.33
LINC02541-202ENST00000452675 EVX2Q03828 476 aa12.99□□□□□ -0.33
LINC02541-202ENST00000452675 MNX1P50219 401 aaPredicted RBP12.96□□□□□ -0.33
LINC02541-202ENST00000452675 SP7Q8TDD2 431 aaPredicted RBP12.96□□□□□ -0.33
LINC02541-202ENST00000452675 FBXO3Q9UK99 471 aa12.96□□□□□ -0.33
LINC02541-202ENST00000452675 MIER1Q8N108 512 aa12.94□□□□□ -0.34
LINC02541-202ENST00000452675 NPM1P06748 294 aaKnown RBP eCLIP12.91□□□□□ -0.34
LINC02541-202ENST00000452675 CD44P16070 742 aaKnown RBP12.91□□□□□ -0.34
LINC02541-202ENST00000452675 PLEKHG5O94827 1062 aa12.9□□□□□ -0.34
LINC02541-202ENST00000452675 PLCD3Q8N3E9 789 aa12.9□□□□□ -0.34
LINC02541-202ENST00000452675 VASPP50552 380 aaPredicted RBP12.8□□□□□ -0.36
LINC02541-202ENST00000452675 ZRANB1Q9UGI0 708 aa12.79□□□□□ -0.36
LINC02541-202ENST00000452675 ZBTB47Q9UFB7 747 aaPredicted RBP12.77□□□□□ -0.37
LINC02541-202ENST00000452675 PAK3O75914 559 aaPredicted RBP12.76□□□□□ -0.37
LINC02541-202ENST00000452675 ZNF579Q8NAF0 562 aaKnown RBP12.74□□□□□ -0.37
LINC02541-202ENST00000452675 GABBR2O75899 941 aa12.72□□□□□ -0.37
LINC02541-202ENST00000452675 RASEFQ8IZ41 740 aa12.68□□□□□ -0.38
LINC02541-202ENST00000452675 TSPYL2Q9H2G4 693 aaPredicted RBP12.68□□□□□ -0.38
LINC02541-202ENST00000452675 NUBP1P53384 320 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms