Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC9.58□□□□□ -0.88
TRIM35Q9UPQ4 AC097641.3-201ENST00000613523 464 ntBASIC9.58□□□□□ -0.88
TRIM35Q9UPQ4 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC9.58□□□□□ -0.88
TRIM35Q9UPQ4 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC9.58□□□□□ -0.88
TRIM35Q9UPQ4 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TRIM35Q9UPQ4 AC015689.2-201ENST00000528172 1738 ntBASIC9.58□□□□□ -0.88
TRIM35Q9UPQ4 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
TRIM35Q9UPQ4 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TRIM35Q9UPQ4 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TRIM35Q9UPQ4 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TRIM35Q9UPQ4 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
TRIM35Q9UPQ4 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
TRIM35Q9UPQ4 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
TRIM35Q9UPQ4 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC9.58□□□□□ -0.88
TRIM35Q9UPQ4 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 MAPK10-377ENST00000642006 2752 ntBASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 RNU4-20P-201ENST00000365601 151 ntBASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 RNU6-26P-201ENST00000383985 107 ntBASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 SNORA70.8-201ENST00000384231 136 ntBASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 Y_RNA.608-201ENST00000410647 95 ntBASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 RAC1P6-201ENST00000423911 575 ntBASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 CALM1P2-201ENST00000452941 448 ntBASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 DNAJB5P1-201ENST00000454004 806 ntBASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 SNORA35.1-201ENST00000458908 128 ntBASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 AL928654.1-201ENST00000476081 354 ntBASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 RBM22P12-201ENST00000567098 1255 ntBASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 PTCHD3P1-201ENST00000612350 537 ntBASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 PPBPP2-201ENST00000513150 1362 ntBASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 AL162171.3-201ENST00000617439 3178 ntBASIC9.57□□□□□ -0.88
TRIM35Q9UPQ4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 ACVR1-201ENST00000263640 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 AC104964.2-201ENST00000562242 4641 ntBASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 OR4A15-201ENST00000314706 1035 ntBASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 RNU6-223P-201ENST00000362830 107 ntBASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 SNORD65-201ENST00000391079 73 ntBASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 RN7SKP247-201ENST00000411094 308 ntBASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 ATP6V1G1P7-201ENST00000415853 349 ntBASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 Z93019.1-201ENST00000416450 973 ntBASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 RPL7P57-201ENST00000423238 740 ntBASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 ARL5AP4-201ENST00000430731 512 ntBASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 AC104698.1-201ENST00000435671 276 ntBASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 AL359672.1-201ENST00000442302 409 ntBASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 OR51P1P-201ENST00000447547 942 ntBASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 CYCSP44-201ENST00000448560 313 ntBASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 AC093799.1-201ENST00000452411 499 ntBASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 RN7SL251P-201ENST00000464175 297 ntBASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 AC026336.1-201ENST00000466577 351 ntBASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 RNU6-255P-201ENST00000516957 105 ntBASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 IGLV1-62-201ENST00000518003 441 ntBASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC9.56□□□□□ -0.88
TRIM35Q9UPQ4 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC9.56□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms