RNA–Protein interactions for RNA: ENST00000411094.1

RN7SKP247-201, Transcript of RNA, 7SK small nuclear pseudogene 247, humanhuman

BASIC

Gene RN7SKP247, Length 308 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP247-201ENST00000411094 AEBP2Q6ZN18 517 aaPredicted RBP20■□□□□ 0.79
RN7SKP247-201ENST00000411094 CHIC1Q5VXU3 224 aa19.02■□□□□ 0.64
RN7SKP247-201ENST00000411094 SENP3Q9H4L4 574 aaPredicted RBP17.14■□□□□ 0.33
RN7SKP247-201ENST00000411094 PHF23Q9BUL5 403 aaPredicted RBP16.9■□□□□ 0.3
RN7SKP247-201ENST00000411094 FOXD1Q16676 465 aa15.93■□□□□ 0.14
RN7SKP247-201ENST00000411094 PLPPR3Q6T4P5 718 aa15.23■□□□□ 0.03
RN7SKP247-201ENST00000411094 MSH5O43196 834 aa14.97□□□□□ -0.01
RN7SKP247-201ENST00000411094 PIAS4Q8N2W9 510 aaPredicted RBP14.93□□□□□ -0.02
RN7SKP247-201ENST00000411094 PPP6R1Q9UPN7 881 aa14.87□□□□□ -0.03
RN7SKP247-201ENST00000411094 ADRA2BP18089 450 aa14.85□□□□□ -0.03
RN7SKP247-201ENST00000411094 POTEDQ86YR6 584 aa14.59□□□□□ -0.07
RN7SKP247-201ENST00000411094 SCAF1Q9H7N4 1312 aaKnown RBP13.67□□□□□ -0.22
RN7SKP247-201ENST00000411094 MAPK8IP2Q13387 824 aaPredicted RBP13.63□□□□□ -0.23
RN7SKP247-201ENST00000411094 DMRT2Q9Y5R5 561 aa13.56□□□□□ -0.24
RN7SKP247-201ENST00000411094 PPP4R3CPQ6ZMV5 832 aa13.34□□□□□ -0.27
RN7SKP247-201ENST00000411094 DCAF8L1A6NGE4 600 aa13.1□□□□□ -0.31
RN7SKP247-201ENST00000411094 CNKSR2Q8WXI2 1034 aa13.1□□□□□ -0.31
RN7SKP247-201ENST00000411094 HOXD11P31277 338 aaPredicted RBP13.05□□□□□ -0.32
RN7SKP247-201ENST00000411094 RNF216Q9NWF9 866 aaPredicted RBP12.98□□□□□ -0.33
RN7SKP247-201ENST00000411094 CACNB1Q02641 598 aaPredicted RBP12.88□□□□□ -0.35
RN7SKP247-201ENST00000411094 NCBP3Q53F19 620 aaKnown RBP12.88□□□□□ -0.35
RN7SKP247-201ENST00000411094 RNF39Q9H2S5 420 aa12.73□□□□□ -0.37
RN7SKP247-201ENST00000411094 NPM3O75607 178 aaKnown RBP12.61□□□□□ -0.39
RN7SKP247-201ENST00000411094 DNAJC5BQ9UF47 199 aa12.61□□□□□ -0.39
RN7SKP247-201ENST00000411094 C1QBPQ07021 282 aaKnown RBP12.58□□□□□ -0.4
RN7SKP247-201ENST00000411094 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.51□□□□□ -0.41
RN7SKP247-201ENST00000411094 KCNA4P22459 653 aa12.36□□□□□ -0.43
RN7SKP247-201ENST00000411094 U3KPZ7 1027 aaPredicted RBP12.17□□□□□ -0.46
RN7SKP247-201ENST00000411094 CAPN15O75808 1086 aa12.05□□□□□ -0.48
RN7SKP247-201ENST00000411094 SLC4A2P04920 1241 aa12.02□□□□□ -0.49
RN7SKP247-201ENST00000411094 SPINK5Q9NQ38 1064 aaPredicted RBP12□□□□□ -0.49
RN7SKP247-201ENST00000411094 APLP2Q06481 763 aa11.95□□□□□ -0.5
RN7SKP247-201ENST00000411094 DSG3P32926 999 aa11.92□□□□□ -0.5
RN7SKP247-201ENST00000411094 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.91□□□□□ -0.5
RN7SKP247-201ENST00000411094 HNRNPUL2Q1KMD3 747 aaKnown RBP11.91□□□□□ -0.5
RN7SKP247-201ENST00000411094 TRHP20396 242 aaPredicted RBP11.85□□□□□ -0.51
RN7SKP247-201ENST00000411094 ZNF219Q9P2Y4 722 aaPredicted RBP11.83□□□□□ -0.52
RN7SKP247-201ENST00000411094 SAMD1Q6SPF0 538 aaPredicted RBP11.82□□□□□ -0.52
RN7SKP247-201ENST00000411094 ABCB7O75027 752 aa11.75□□□□□ -0.53
RN7SKP247-201ENST00000411094 MYCNP04198 464 aaPredicted RBP11.71□□□□□ -0.53
RN7SKP247-201ENST00000411094 SLC4A1APQ9BWU0 796 aaKnown RBP11.71□□□□□ -0.53
RN7SKP247-201ENST00000411094 FOXD4L1Q9NU39 408 aa11.57□□□□□ -0.56
RN7SKP247-201ENST00000411094 POLA2Q14181 598 aa11.51□□□□□ -0.57
RN7SKP247-201ENST00000411094 POTEHQ6S545 545 aa11.46□□□□□ -0.57
RN7SKP247-201ENST00000411094 RBM42Q9BTD8 480 aaKnown RBP11.44□□□□□ -0.58
RN7SKP247-201ENST00000411094 ATF5Q9Y2D1 282 aaPredicted RBP11.37□□□□□ -0.59
RN7SKP247-201ENST00000411094 ZBTB22O15209 634 aa11.31□□□□□ -0.6
RN7SKP247-201ENST00000411094 ZBTB12Q9Y330 459 aaPredicted RBP11.31□□□□□ -0.6
RN7SKP247-201ENST00000411094 ATXN8OSP0DMR3 200 aa11.21□□□□□ -0.61
RN7SKP247-201ENST00000411094 CHRDL2Q6WN34 429 aa11.16□□□□□ -0.62
RN7SKP247-201ENST00000411094 AKT1S1Q96B36 256 aa11.15□□□□□ -0.62
RN7SKP247-201ENST00000411094 OSCARQ8IYS5 282 aa11.13□□□□□ -0.63
RN7SKP247-201ENST00000411094 FBLN2P98095 1184 aa11.04□□□□□ -0.64
RN7SKP247-201ENST00000411094 REM2Q8IYK8 340 aaPredicted RBP11.03□□□□□ -0.64
RN7SKP247-201ENST00000411094 EHMT2Q96KQ7 1210 aa10.97□□□□□ -0.65
RN7SKP247-201ENST00000411094 SPDYE2BA6NHP3 402 aa10.93□□□□□ -0.66
RN7SKP247-201ENST00000411094 SPDYE6P0CI01 402 aa10.93□□□□□ -0.66
RN7SKP247-201ENST00000411094 SPDYE2Q495Y8 402 aa10.93□□□□□ -0.66
RN7SKP247-201ENST00000411094 PITPNM1O00562 1244 aa10.9□□□□□ -0.66
RN7SKP247-201ENST00000411094 PIP4P2Q8N4L2 257 aa10.88□□□□□ -0.67
RN7SKP247-201ENST00000411094 MKRN4PQ13434 485 aaPredicted RBP10.84□□□□□ -0.67
RN7SKP247-201ENST00000411094 ZNF692Q9BU19 519 aaPredicted RBP10.82□□□□□ -0.68
RN7SKP247-201ENST00000411094 CSRNP3Q8WYN3 585 aa10.81□□□□□ -0.68
RN7SKP247-201ENST00000411094 FXR2P51116 673 aaKnown RBP eCLIP10.8□□□□□ -0.68
RN7SKP247-201ENST00000411094 SPDYE1Q8NFV5 336 aaPredicted RBP10.76□□□□□ -0.69
RN7SKP247-201ENST00000411094 CLEC11AQ9Y240 323 aa10.76□□□□□ -0.69
RN7SKP247-201ENST00000411094 HAX1O00165 279 aa10.74□□□□□ -0.69
RN7SKP247-201ENST00000411094 SP7Q8TDD2 431 aaPredicted RBP10.74□□□□□ -0.69
RN7SKP247-201ENST00000411094 SSUH2Q9Y2M2 353 aa10.74□□□□□ -0.69
RN7SKP247-201ENST00000411094 PRKAR2AP13861 404 aaKnown RBP10.65□□□□□ -0.7
RN7SKP247-201ENST00000411094 PABPN1Q86U42 306 aaKnown RBP eCLIP10.64□□□□□ -0.71
RN7SKP247-201ENST00000411094 PRR29P0C7W0 189 aa10.58□□□□□ -0.72
RN7SKP247-201ENST00000411094 EVX2Q03828 476 aa10.51□□□□□ -0.73
RN7SKP247-201ENST00000411094 CHADLQ6NUI6 762 aa10.51□□□□□ -0.73
RN7SKP247-201ENST00000411094 C19orf67A6NJJ6 358 aa10.45□□□□□ -0.74
RN7SKP247-201ENST00000411094 SPDYE4A6NLX3 237 aa10.4□□□□□ -0.74
RN7SKP247-201ENST00000411094 STAG3Q9UJ98 1225 aa10.38□□□□□ -0.75
RN7SKP247-201ENST00000411094 FARP1Q9Y4F1 1045 aaPredicted RBP10.36□□□□□ -0.75
RN7SKP247-201ENST00000411094 GABBR2O75899 941 aa10.32□□□□□ -0.76
RN7SKP247-201ENST00000411094 CD44P16070 742 aaKnown RBP10.31□□□□□ -0.76
RN7SKP247-201ENST00000411094 CREBZFQ9NS37 354 aa10.25□□□□□ -0.77
RN7SKP247-201ENST00000411094 CLCN6P51797 869 aa10.2□□□□□ -0.78
RN7SKP247-201ENST00000411094 ZRANB1Q9UGI0 708 aa10.18□□□□□ -0.78
RN7SKP247-201ENST00000411094 PAK3O75914 559 aaPredicted RBP10.14□□□□□ -0.79
RN7SKP247-201ENST00000411094 NPM1P06748 294 aaKnown RBP eCLIP10.14□□□□□ -0.79
RN7SKP247-201ENST00000411094 ZNF579Q8NAF0 562 aaKnown RBP10.13□□□□□ -0.79
RN7SKP247-201ENST00000411094 DCBLD2Q96PD2 775 aa10.11□□□□□ -0.79
RN7SKP247-201ENST00000411094 LHX8Q68G74 356 aa10.08□□□□□ -0.8
RN7SKP247-201ENST00000411094 PROM2Q8N271 834 aa10.06□□□□□ -0.8
RN7SKP247-201ENST00000411094 POTEIP0CG38 1075 aa10.05□□□□□ -0.8
RN7SKP247-201ENST00000411094 MNX1P50219 401 aaPredicted RBP10.03□□□□□ -0.8
RN7SKP247-201ENST00000411094 PLEKHG5O94827 1062 aa10.01□□□□□ -0.81
RN7SKP247-201ENST00000411094 GALR2O43603 387 aaPredicted RBP10□□□□□ -0.81
RN7SKP247-201ENST00000411094 PHF12Q96QT6 1004 aa10□□□□□ -0.81
RN7SKP247-201ENST00000411094 MIER1Q8N108 512 aa9.96□□□□□ -0.82
RN7SKP247-201ENST00000411094 TSPYL2Q9H2G4 693 aaPredicted RBP9.93□□□□□ -0.82
RN7SKP247-201ENST00000411094 PLCD3Q8N3E9 789 aa9.89□□□□□ -0.83
RN7SKP247-201ENST00000411094 FKBP8Q14318 412 aa9.87□□□□□ -0.83
RN7SKP247-201ENST00000411094 MS4A3Q96HJ5 214 aa9.86□□□□□ -0.83
RN7SKP247-201ENST00000411094 CCDC61Q9Y6R9 512 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms