RNA–Protein interactions for RNA: ENST00000265379.10

COL6A5-201, Transcript of collagen type VI alpha 5 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A5, Length 9,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-201ENST00000265379 NISCHQ9Y2I1 1504 aa15.8■□□□□ 0.12
COL6A5-201ENST00000265379 CCDC180Q9P1Z9 1646 aa13.92□□□□□ -0.18
COL6A5-201ENST00000265379 DCAF8L2P0C7V8 631 aa13.65□□□□□ -0.22
COL6A5-201ENST00000265379 PELP1Q8IZL8 1130 aaKnown RBP13.32□□□□□ -0.28
COL6A5-201ENST00000265379 DCAF1Q9Y4B6 1507 aa13.27□□□□□ -0.29
COL6A5-201ENST00000265379 ZCCHC6Q5VYS8 1495 aaKnown RBP13.27□□□□□ -0.29
COL6A5-201ENST00000265379 MYT1Q01538 1121 aa13.23□□□□□ -0.29
COL6A5-201ENST00000265379 SUPT5HO00267 1087 aaKnown RBP13.16□□□□□ -0.3
COL6A5-201ENST00000265379 MYO15BQ96JP2 1530 aa13.12□□□□□ -0.31
COL6A5-201ENST00000265379 SHROOM4Q9ULL8 1493 aa13.11□□□□□ -0.31
COL6A5-201ENST00000265379 NACADO15069 1562 aa13.03□□□□□ -0.32
COL6A5-201ENST00000265379 RB1CC1Q8TDY2 1594 aa12.93□□□□□ -0.34
COL6A5-201ENST00000265379 FAM9AQ8IZU1 332 aaPredicted RBP12.86□□□□□ -0.35
COL6A5-201ENST00000265379 APLP2Q06481 763 aa12.73□□□□□ -0.37
COL6A5-201ENST00000265379 ZEB1P37275 1124 aaPredicted RBP12.73□□□□□ -0.37
COL6A5-201ENST00000265379 ABCC9O60706 1549 aa12.68□□□□□ -0.38
COL6A5-201ENST00000265379 TRIM41Q8WV44 630 aa12.67□□□□□ -0.38
COL6A5-201ENST00000265379 TTBK1Q5TCY1 1321 aaPredicted RBP12.61□□□□□ -0.39
COL6A5-201ENST00000265379 YTHDC1Q96MU7 727 aaKnown RBP12.6□□□□□ -0.39
COL6A5-201ENST00000265379 SCRIBQ14160 1630 aa12.57□□□□□ -0.4
COL6A5-201ENST00000265379 CCER1Q8TC90 406 aaPredicted RBP12.56□□□□□ -0.4
COL6A5-201ENST00000265379 BAZ1AQ9NRL2 1556 aaPredicted RBP12.54□□□□□ -0.4
COL6A5-201ENST00000265379 ERICH6Q7L0X2 663 aa12.48□□□□□ -0.41
COL6A5-201ENST00000265379 EEA1Q15075 1411 aa12.46□□□□□ -0.42
COL6A5-201ENST00000265379 CHIC1Q5VXU3 224 aa12.41□□□□□ -0.42
COL6A5-201ENST00000265379 SMARCA2P51531 1590 aa12.33□□□□□ -0.44
COL6A5-201ENST00000265379 TRIM26Q12899 539 aaPredicted RBP12.28□□□□□ -0.44
COL6A5-201ENST00000265379 RSF1Q96T23 1441 aaPredicted RBP12.26□□□□□ -0.45
COL6A5-201ENST00000265379 UBTFP17480 764 aaKnown RBP12.25□□□□□ -0.45
COL6A5-201ENST00000265379 EHMT2Q96KQ7 1210 aa12.23□□□□□ -0.45
COL6A5-201ENST00000265379 ACIN1Q9UKV3 1341 aaKnown RBP12.23□□□□□ -0.45
COL6A5-201ENST00000265379 BAZ1BQ9UIG0 1483 aaKnown RBP12.19□□□□□ -0.46
COL6A5-201ENST00000265379 CENPBP07199 599 aaPredicted RBP12.18□□□□□ -0.46
COL6A5-201ENST00000265379 TOP2AP11388 1531 aaKnown RBP12.17□□□□□ -0.46
COL6A5-201ENST00000265379 SMARCA4P51532 1647 aa12.09□□□□□ -0.47
COL6A5-201ENST00000265379 PCGF6Q9BYE7 350 aa12.07□□□□□ -0.48
COL6A5-201ENST00000265379 NEFLP07196 543 aa12.05□□□□□ -0.48
COL6A5-201ENST00000265379 GOLGA3Q08378 1498 aa12.01□□□□□ -0.49
COL6A5-201ENST00000265379 CEP164Q9UPV0 1460 aa12.01□□□□□ -0.49
COL6A5-201ENST00000265379 CSRNP3Q8WYN3 585 aa12□□□□□ -0.49
COL6A5-201ENST00000265379 WRNQ14191 1432 aaPredicted RBP eCLIP11.99□□□□□ -0.49
COL6A5-201ENST00000265379 PABPN1Q86U42 306 aaKnown RBP eCLIP11.97□□□□□ -0.49
COL6A5-201ENST00000265379 HRCP23327 699 aa11.95□□□□□ -0.5
COL6A5-201ENST00000265379 KIF27Q86VH2 1401 aa11.94□□□□□ -0.5
COL6A5-201ENST00000265379 ABCC8Q09428 1581 aa11.94□□□□□ -0.5
COL6A5-201ENST00000265379 HMGXB3Q12766 1538 aa11.92□□□□□ -0.5
COL6A5-201ENST00000265379 MROH2BQ7Z745 1585 aa11.91□□□□□ -0.5
COL6A5-201ENST00000265379 DAXXQ9UER7 740 aaPredicted RBP11.91□□□□□ -0.5
COL6A5-201ENST00000265379 TNIKQ9UKE5 1360 aa11.89□□□□□ -0.51
COL6A5-201ENST00000265379 CDK11AQ9UQ88 783 aaPredicted RBP11.86□□□□□ -0.51
COL6A5-201ENST00000265379 PEG3Q9GZU2 1588 aa11.85□□□□□ -0.51
COL6A5-201ENST00000265379 CECR2Q9BXF3 1484 aa11.84□□□□□ -0.51
COL6A5-201ENST00000265379 FHAD1B1AJZ9 1412 aa11.82□□□□□ -0.52
COL6A5-201ENST00000265379 ATP1B4Q9UN42 357 aaPredicted RBP11.82□□□□□ -0.52
COL6A5-201ENST00000265379 CLIP1P30622 1438 aa11.81□□□□□ -0.52
COL6A5-201ENST00000265379 ATAD2BQ9ULI0 1458 aa11.8□□□□□ -0.52
COL6A5-201ENST00000265379 WIZO95785 1651 aa11.8□□□□□ -0.52
COL6A5-201ENST00000265379 CCDC88BA6NC98 1476 aa11.8□□□□□ -0.52
COL6A5-201ENST00000265379 NCAPD3P42695 1498 aa11.8□□□□□ -0.52
COL6A5-201ENST00000265379 RANGAP1P46060 587 aaPredicted RBP11.8□□□□□ -0.52
COL6A5-201ENST00000265379 PDS5BQ9NTI5 1447 aa11.8□□□□□ -0.52
COL6A5-201ENST00000265379 CLSPNQ9HAW4 1339 aa11.79□□□□□ -0.52
COL6A5-201ENST00000265379 GLIPR1L2Q4G1C9 344 aa11.73□□□□□ -0.53
COL6A5-201ENST00000265379 CEP162Q5TB80 1403 aa11.73□□□□□ -0.53
COL6A5-201ENST00000265379 ERICH3Q5RHP9 1530 aa11.69□□□□□ -0.54
COL6A5-201ENST00000265379 LOC105371045A0A1W2PR82 267 aa11.68□□□□□ -0.54
COL6A5-201ENST00000265379 CADPSQ9ULU8 1353 aa11.67□□□□□ -0.54
COL6A5-201ENST00000265379 KIF21BO75037 1637 aa11.67□□□□□ -0.54
COL6A5-201ENST00000265379 EIF4G1Q04637 1599 aaKnown RBP11.67□□□□□ -0.54
COL6A5-201ENST00000265379 VPS8Q8N3P4 1428 aa11.64□□□□□ -0.55
COL6A5-201ENST00000265379 UNC13AQ9UPW8 1703 aa11.63□□□□□ -0.55
COL6A5-201ENST00000265379 FMN1Q68DA7 1419 aa11.63□□□□□ -0.55
COL6A5-201ENST00000265379 TOP2BQ02880 1626 aa11.58□□□□□ -0.56
COL6A5-201ENST00000265379 TIMELESSQ9UNS1 1208 aa11.57□□□□□ -0.56
COL6A5-201ENST00000265379 CFTRP13569 1480 aa11.56□□□□□ -0.56
COL6A5-201ENST00000265379 RTL5Q5HYW3 569 aaPredicted RBP11.56□□□□□ -0.56
COL6A5-201ENST00000265379 ZNF316A6NFI3 1004 aaPredicted RBP11.56□□□□□ -0.56
COL6A5-201ENST00000265379 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.55□□□□□ -0.56
COL6A5-201ENST00000265379 HNRNPUL2Q1KMD3 747 aaKnown RBP11.55□□□□□ -0.56
COL6A5-201ENST00000265379 BICRAQ9NZM4 1560 aa11.55□□□□□ -0.56
COL6A5-201ENST00000265379 CUX2O14529 1486 aa11.54□□□□□ -0.56
COL6A5-201ENST00000265379 RAPGEF2Q9Y4G8 1499 aa11.54□□□□□ -0.56
COL6A5-201ENST00000265379 MTUS2Q5JR59 1369 aa11.53□□□□□ -0.56
COL6A5-201ENST00000265379 EFCAB5A4FU69 1503 aa11.53□□□□□ -0.56
COL6A5-201ENST00000265379 MYT1LQ9UL68 1186 aa11.53□□□□□ -0.56
COL6A5-201ENST00000265379 PRDM2Q13029 1718 aa11.53□□□□□ -0.56
COL6A5-201ENST00000265379 ERCC6Q03468 1493 aa11.53□□□□□ -0.56
COL6A5-201ENST00000265379 CARMIL1Q5VZK9 1371 aa11.52□□□□□ -0.57
COL6A5-201ENST00000265379 LAMC3Q9Y6N6 1575 aa11.51□□□□□ -0.57
COL6A5-201ENST00000265379 CARMIL2Q6F5E8 1435 aa11.49□□□□□ -0.57
COL6A5-201ENST00000265379 POLR3GLQ9BT43 218 aa11.48□□□□□ -0.57
COL6A5-201ENST00000265379 CUL7Q14999 1698 aa11.48□□□□□ -0.57
COL6A5-201ENST00000265379 FANCD2Q9BXW9 1451 aa11.47□□□□□ -0.57
COL6A5-201ENST00000265379 FAM50AQ14320 339 aaKnown RBP11.47□□□□□ -0.57
COL6A5-201ENST00000265379 CUX1P39880 1505 aa11.46□□□□□ -0.57
COL6A5-201ENST00000265379 DNMBPQ6XZF7 1577 aa11.46□□□□□ -0.58
COL6A5-201ENST00000265379 BIVM-ERCC5R4GMW8 1640 aa11.45□□□□□ -0.58
COL6A5-201ENST00000265379 CC2D2AQ9P2K1 1620 aa11.44□□□□□ -0.58
COL6A5-201ENST00000265379 SLC24A1O60721 1099 aa11.44□□□□□ -0.58
COL6A5-201ENST00000265379 ARHGAP35Q9NRY4 1499 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms