Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC011933.2-201ENST00000578539 2790 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.62□□□□□ -1.35
RHBDL3P58872 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RHBDL3P58872 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RHBDL3P58872 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
RHBDL3P58872 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.62□□□□□ -1.35
RHBDL3P58872 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.62□□□□□ -1.35
RHBDL3P58872 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
RHBDL3P58872 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
RHBDL3P58872 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
RHBDL3P58872 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RHBDL3P58872 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RHBDL3P58872 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
RHBDL3P58872 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
RHBDL3P58872 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RHBDL3P58872 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RHBDL3P58872 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
RHBDL3P58872 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
RHBDL3P58872 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RHBDL3P58872 RNU1-19P-201ENST00000363306 165 ntBASIC6.62□□□□□ -1.35
RHBDL3P58872 RNU1-59P-201ENST00000364829 162 ntBASIC6.62□□□□□ -1.35
RHBDL3P58872 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.62□□□□□ -1.35
RHBDL3P58872 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
RHBDL3P58872 MIR551A-201ENST00000385042 96 ntBASIC6.62□□□□□ -1.35
RHBDL3P58872 RNA5SP339-201ENST00000390987 122 ntBASIC6.62□□□□□ -1.35
RHBDL3P58872 AC005042.1-201ENST00000393397 800 ntBASIC6.62□□□□□ -1.35
RHBDL3P58872 AL353692.2-201ENST00000407054 335 ntBASIC6.62□□□□□ -1.35
RHBDL3P58872 RNU4-74P-201ENST00000411280 161 ntBASIC6.62□□□□□ -1.35
RHBDL3P58872 MTND2P2-201ENST00000434633 945 ntBASIC6.62□□□□□ -1.35
RHBDL3P58872 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.62□□□□□ -1.35
RHBDL3P58872 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.62□□□□□ -1.35
RHBDL3P58872 MEMO1P4-201ENST00000453590 386 ntBASIC6.62□□□□□ -1.35
RHBDL3P58872 AL035090.1-201ENST00000454835 332 ntBASIC6.62□□□□□ -1.35
RHBDL3P58872 AC072052.1-201ENST00000496556 306 ntBASIC6.62□□□□□ -1.35
RHBDL3P58872 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.62□□□□□ -1.35
RHBDL3P58872 RN7SKP141-201ENST00000516167 338 ntBASIC6.62□□□□□ -1.35
RHBDL3P58872 CDC42P3-201ENST00000518493 633 ntBASIC6.62□□□□□ -1.35
RHBDL3P58872 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.62□□□□□ -1.35
RHBDL3P58872 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.62□□□□□ -1.35
RHBDL3P58872 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.62□□□□□ -1.35
RHBDL3P58872 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.62□□□□□ -1.35
RHBDL3P58872 SULT1C2P2-201ENST00000562517 294 ntBASIC6.62□□□□□ -1.35
RHBDL3P58872 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC6.62□□□□□ -1.35
RHBDL3P58872 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC6.62□□□□□ -1.35
RHBDL3P58872 SS18L2P2-201ENST00000583960 235 ntBASIC6.62□□□□□ -1.35
RHBDL3P58872 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC6.62□□□□□ -1.35
RHBDL3P58872 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.62□□□□□ -1.35
RHBDL3P58872 U1.25-201ENST00000614085 162 ntBASIC6.62□□□□□ -1.35
RHBDL3P58872 AC011472.4-201ENST00000615848 491 ntBASIC6.62□□□□□ -1.35
RHBDL3P58872 AP000720.1-201ENST00000625091 483 ntBASIC6.62□□□□□ -1.35
RHBDL3P58872 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC6.62□□□□□ -1.35
RHBDL3P58872 SAMMSON-227ENST00000642114 1199 ntBASIC6.62□□□□□ -1.35
RHBDL3P58872 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.62□□□□□ -1.35
RHBDL3P58872 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RHBDL3P58872 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
RHBDL3P58872 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.62□□□□□ -1.35
RHBDL3P58872 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.62□□□□□ -1.35
RHBDL3P58872 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RHBDL3P58872 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
RHBDL3P58872 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
RHBDL3P58872 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RHBDL3P58872 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
RHBDL3P58872 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
RHBDL3P58872 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RHBDL3P58872 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
RHBDL3P58872 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.61□□□□□ -1.35
RHBDL3P58872 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.61□□□□□ -1.35
RHBDL3P58872 RNU1-136P-201ENST00000384181 164 ntBASIC6.61□□□□□ -1.35
RHBDL3P58872 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.61□□□□□ -1.35
RHBDL3P58872 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC6.61□□□□□ -1.35
RHBDL3P58872 AP000936.3-201ENST00000438127 255 ntBASIC6.61□□□□□ -1.35
RHBDL3P58872 RN7SL222P-201ENST00000476452 299 ntBASIC6.61□□□□□ -1.35
RHBDL3P58872 AC108729.2-201ENST00000476543 840 ntBASIC6.61□□□□□ -1.35
RHBDL3P58872 AC079841.1-201ENST00000481228 950 ntBASIC6.61□□□□□ -1.35
RHBDL3P58872 RPL32P9-201ENST00000487963 407 ntBASIC6.61□□□□□ -1.35
RHBDL3P58872 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.61□□□□□ -1.35
RHBDL3P58872 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
RHBDL3P58872 OSBPL9P3-201ENST00000534523 595 ntBASIC6.61□□□□□ -1.35
RHBDL3P58872 AC137627.1-201ENST00000545761 289 ntBASIC6.61□□□□□ -1.35
RHBDL3P58872 AL049779.2-201ENST00000553847 315 ntBASIC6.61□□□□□ -1.35
RHBDL3P58872 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RHBDL3P58872 METTL8-218ENST00000638989 876 ntTSL 5 BASIC6.61□□□□□ -1.35
RHBDL3P58872 AC079776.5-201ENST00000641920 211 ntBASIC6.61□□□□□ -1.35
RHBDL3P58872 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
RHBDL3P58872 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.61□□□□□ -1.35
RHBDL3P58872 AC068769.1-201ENST00000474767 2426 ntBASIC6.61□□□□□ -1.35
RHBDL3P58872 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.61□□□□□ -1.35
RHBDL3P58872 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.61□□□□□ -1.35
RHBDL3P58872 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RHBDL3P58872 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.61□□□□□ -1.35
RHBDL3P58872 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.61□□□□□ -1.35
RHBDL3P58872 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RHBDL3P58872 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
RHBDL3P58872 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
RHBDL3P58872 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RHBDL3P58872 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
RHBDL3P58872 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.6□□□□□ -1.35
RHBDL3P58872 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
RHBDL3P58872 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC6.6□□□□□ -1.35
RHBDL3P58872 RNU6-609P-201ENST00000365459 107 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms