RNA–Protein interactions for RNA: ENST00000395065.7

NXF3-201, Transcript of nuclear RNA export factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF3, Length 1,938 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-201ENST00000395065 NISCHQ9Y2I1 1504 aa12.37□□□□□ -0.43
NXF3-201ENST00000395065 CHIC1Q5VXU3 224 aa11.38□□□□□ -0.59
NXF3-201ENST00000395065 AEBP2Q6ZN18 517 aaPredicted RBP11.35□□□□□ -0.59
NXF3-201ENST00000395065 HRCP23327 699 aa10.72□□□□□ -0.69
NXF3-201ENST00000395065 CCDC180Q9P1Z9 1646 aa10.6□□□□□ -0.71
NXF3-201ENST00000395065 SHROOM4Q9ULL8 1493 aa10.51□□□□□ -0.73
NXF3-201ENST00000395065 ZCCHC6Q5VYS8 1495 aaKnown RBP10.47□□□□□ -0.73
NXF3-201ENST00000395065 MYO15BQ96JP2 1530 aa10.43□□□□□ -0.74
NXF3-201ENST00000395065 PELP1Q8IZL8 1130 aaKnown RBP10.42□□□□□ -0.74
NXF3-201ENST00000395065 ABCC9O60706 1549 aa10.4□□□□□ -0.74
NXF3-201ENST00000395065 SUPT5HO00267 1087 aaKnown RBP10.4□□□□□ -0.74
NXF3-201ENST00000395065 PCGF6Q9BYE7 350 aa10.39□□□□□ -0.75
NXF3-201ENST00000395065 PPARGC1BQ86YN6 1023 aaKnown RBP10.37□□□□□ -0.75
NXF3-201ENST00000395065 DCAF1Q9Y4B6 1507 aa10.32□□□□□ -0.76
NXF3-201ENST00000395065 DCAF8L2P0C7V8 631 aa10.21□□□□□ -0.77
NXF3-201ENST00000395065 TRIM26Q12899 539 aaPredicted RBP10.16□□□□□ -0.78
NXF3-201ENST00000395065 ZEB1P37275 1124 aaPredicted RBP10.12□□□□□ -0.79
NXF3-201ENST00000395065 SCAF1Q9H7N4 1312 aaKnown RBP10.1□□□□□ -0.79
NXF3-201ENST00000395065 PHF23Q9BUL5 403 aaPredicted RBP10.08□□□□□ -0.8
NXF3-201ENST00000395065 LOC105371045A0A1W2PR82 267 aa10.05□□□□□ -0.8
NXF3-201ENST00000395065 MYT1Q01538 1121 aa10.05□□□□□ -0.8
NXF3-201ENST00000395065 SCRIBQ14160 1630 aa9.92□□□□□ -0.82
NXF3-201ENST00000395065 DNAJC5BQ9UF47 199 aa9.9□□□□□ -0.83
NXF3-201ENST00000395065 ACIN1Q9UKV3 1341 aaKnown RBP9.89□□□□□ -0.83
NXF3-201ENST00000395065 NEUROD1Q13562 356 aa9.82□□□□□ -0.84
NXF3-201ENST00000395065 NACADO15069 1562 aa9.76□□□□□ -0.85
NXF3-201ENST00000395065 RSF1Q96T23 1441 aaPredicted RBP9.75□□□□□ -0.85
NXF3-201ENST00000395065 GTF3C3Q9Y5Q9 886 aa9.75□□□□□ -0.85
NXF3-201ENST00000395065 UNC13AQ9UPW8 1703 aa9.75□□□□□ -0.85
NXF3-201ENST00000395065 RB1CC1Q8TDY2 1594 aa9.74□□□□□ -0.85
NXF3-201ENST00000395065 CENPBP07199 599 aaPredicted RBP9.74□□□□□ -0.85
NXF3-201ENST00000395065 PABPN1Q86U42 306 aaKnown RBP eCLIP9.73□□□□□ -0.85
NXF3-201ENST00000395065 TRIM41Q8WV44 630 aa9.69□□□□□ -0.86
NXF3-201ENST00000395065 DIEXFQ68CQ4 756 aaKnown RBP9.68□□□□□ -0.86
NXF3-201ENST00000395065 CECR2Q9BXF3 1484 aa9.65□□□□□ -0.87
NXF3-201ENST00000395065 MROH2BQ7Z745 1585 aa9.62□□□□□ -0.87
NXF3-201ENST00000395065 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.62□□□□□ -0.87
NXF3-201ENST00000395065 CCER1Q8TC90 406 aaPredicted RBP9.61□□□□□ -0.87
NXF3-201ENST00000395065 WIZO95785 1651 aa9.61□□□□□ -0.87
NXF3-201ENST00000395065 PLPPR3Q6T4P5 718 aa9.59□□□□□ -0.87
NXF3-201ENST00000395065 FAM9AQ8IZU1 332 aaPredicted RBP9.56□□□□□ -0.88
NXF3-201ENST00000395065 SENP3Q9H4L4 574 aaPredicted RBP9.56□□□□□ -0.88
NXF3-201ENST00000395065 BICRAQ9NZM4 1560 aa9.55□□□□□ -0.88
NXF3-201ENST00000395065 BAZ1AQ9NRL2 1556 aaPredicted RBP9.54□□□□□ -0.88
NXF3-201ENST00000395065 ZNF316A6NFI3 1004 aaPredicted RBP9.52□□□□□ -0.88
NXF3-201ENST00000395065 WRNQ14191 1432 aaPredicted RBP eCLIP9.52□□□□□ -0.88
NXF3-201ENST00000395065 EHMT2Q96KQ7 1210 aa9.48□□□□□ -0.89
NXF3-201ENST00000395065 EIF4G1Q04637 1599 aaKnown RBP9.47□□□□□ -0.89
NXF3-201ENST00000395065 SMARCA4P51532 1647 aa9.47□□□□□ -0.89
NXF3-201ENST00000395065 TTBK1Q5TCY1 1321 aaPredicted RBP9.46□□□□□ -0.89
NXF3-201ENST00000395065 TOP2AP11388 1531 aaKnown RBP9.43□□□□□ -0.9
NXF3-201ENST00000395065 CLSPNQ9HAW4 1339 aa9.43□□□□□ -0.9
NXF3-201ENST00000395065 MIER1Q8N108 512 aa9.41□□□□□ -0.9
NXF3-201ENST00000395065 SMARCA2P51531 1590 aa9.39□□□□□ -0.91
NXF3-201ENST00000395065 YTHDC1Q96MU7 727 aaKnown RBP9.38□□□□□ -0.91
NXF3-201ENST00000395065 ABCC8Q09428 1581 aa9.37□□□□□ -0.91
NXF3-201ENST00000395065 CCDC88BA6NC98 1476 aa9.37□□□□□ -0.91
NXF3-201ENST00000395065 TNIKQ9UKE5 1360 aa9.36□□□□□ -0.91
NXF3-201ENST00000395065 CEP162Q5TB80 1403 aa9.36□□□□□ -0.91
NXF3-201ENST00000395065 CC2D2AQ9P2K1 1620 aa9.33□□□□□ -0.92
NXF3-201ENST00000395065 ANP32EQ9BTT0 268 aa9.33□□□□□ -0.92
NXF3-201ENST00000395065 SUPT16HQ9Y5B9 1047 aaKnown RBP9.32□□□□□ -0.92
NXF3-201ENST00000395065 TSHZ2Q9NRE2 1034 aa9.29□□□□□ -0.92
NXF3-201ENST00000395065 EEA1Q15075 1411 aa9.28□□□□□ -0.92
NXF3-201ENST00000395065 PEG3Q9GZU2 1588 aa9.27□□□□□ -0.93
NXF3-201ENST00000395065 BCL11AQ9H165 835 aa9.27□□□□□ -0.93
NXF3-201ENST00000395065 SOGA1O94964 1423 aa9.23□□□□□ -0.93
NXF3-201ENST00000395065 CSRNP3Q8WYN3 585 aa9.21□□□□□ -0.93
NXF3-201ENST00000395065 GOLGA3Q08378 1498 aa9.2□□□□□ -0.94
NXF3-201ENST00000395065 RUSC2Q8N2Y8 1516 aa9.19□□□□□ -0.94
NXF3-201ENST00000395065 ATAD2BQ9ULI0 1458 aa9.19□□□□□ -0.94
NXF3-201ENST00000395065 SYNJ1O43426 1573 aa9.18□□□□□ -0.94
NXF3-201ENST00000395065 BAZ1BQ9UIG0 1483 aaKnown RBP9.18□□□□□ -0.94
NXF3-201ENST00000395065 KCNA4P22459 653 aa9.17□□□□□ -0.94
NXF3-201ENST00000395065 HNRNPUL2Q1KMD3 747 aaKnown RBP9.17□□□□□ -0.94
NXF3-201ENST00000395065 UBTFP17480 764 aaKnown RBP9.15□□□□□ -0.95
NXF3-201ENST00000395065 VPS8Q8N3P4 1428 aa9.14□□□□□ -0.95
NXF3-201ENST00000395065 DHX57Q6P158 1386 aaKnown RBP9.13□□□□□ -0.95
NXF3-201ENST00000395065 KIF21BO75037 1637 aa9.13□□□□□ -0.95
NXF3-201ENST00000395065 CLIP1P30622 1438 aa9.12□□□□□ -0.95
NXF3-201ENST00000395065 CEP164Q9UPV0 1460 aa9.12□□□□□ -0.95
NXF3-201ENST00000395065 DNAJC5Q9H3Z4 198 aa9.09□□□□□ -0.95
NXF3-201ENST00000395065 SLC24A1O60721 1099 aa9.08□□□□□ -0.96
NXF3-201ENST00000395065 CUX2O14529 1486 aa9.06□□□□□ -0.96
NXF3-201ENST00000395065 RBM19Q9Y4C8 960 aaKnown RBP9.06□□□□□ -0.96
NXF3-201ENST00000395065 TOP2BQ02880 1626 aa9.06□□□□□ -0.96
NXF3-201ENST00000395065 HMGXB3Q12766 1538 aa9.04□□□□□ -0.96
NXF3-201ENST00000395065 BIVM-ERCC5R4GMW8 1640 aa9.04□□□□□ -0.96
NXF3-201ENST00000395065 APLP2Q06481 763 aa9.03□□□□□ -0.96
NXF3-201ENST00000395065 FKBP8Q14318 412 aa9.01□□□□□ -0.97
NXF3-201ENST00000395065 RRBP1Q9P2E9 1410 aaKnown RBP9.01□□□□□ -0.97
NXF3-201ENST00000395065 NCAPD3P42695 1498 aa9.01□□□□□ -0.97
NXF3-201ENST00000395065 RAPGEF2Q9Y4G8 1499 aa9.01□□□□□ -0.97
NXF3-201ENST00000395065 KCNH8Q96L42 1107 aa9.01□□□□□ -0.97
NXF3-201ENST00000395065 MSH5O43196 834 aa8.98□□□□□ -0.97
NXF3-201ENST00000395065 FANCIQ9NVI1 1328 aa8.98□□□□□ -0.97
NXF3-201ENST00000395065 BCANQ96GW7 911 aa8.97□□□□□ -0.97
NXF3-201ENST00000395065 PRDM2Q13029 1718 aa8.97□□□□□ -0.97
NXF3-201ENST00000395065 CUX1P39880 1505 aa8.97□□□□□ -0.97
NXF3-201ENST00000395065 ERCC6Q03468 1493 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms