RNA–Protein interactions for RNA: ENST00000364829.1

RNU1-59P-201, Transcript of RNA, U1 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU1-59P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-59P-201ENST00000364829 NISCHQ9Y2I1 1504 aa12.37□□□□□ -0.43
RNU1-59P-201ENST00000364829 CCDC180Q9P1Z9 1646 aa10.61□□□□□ -0.71
RNU1-59P-201ENST00000364829 ZCCHC6Q5VYS8 1495 aaKnown RBP10.56□□□□□ -0.72
RNU1-59P-201ENST00000364829 DCAF1Q9Y4B6 1507 aa10.38□□□□□ -0.75
RNU1-59P-201ENST00000364829 SHROOM4Q9ULL8 1493 aa10.24□□□□□ -0.77
RNU1-59P-201ENST00000364829 HRCP23327 699 aa10.19□□□□□ -0.78
RNU1-59P-201ENST00000364829 SUPT5HO00267 1087 aaKnown RBP10.15□□□□□ -0.78
RNU1-59P-201ENST00000364829 CHIC1Q5VXU3 224 aa10.14□□□□□ -0.79
RNU1-59P-201ENST00000364829 MYO15BQ96JP2 1530 aa10.08□□□□□ -0.8
RNU1-59P-201ENST00000364829 ABCC9O60706 1549 aa10.01□□□□□ -0.81
RNU1-59P-201ENST00000364829 ZEB1P37275 1124 aaPredicted RBP9.89□□□□□ -0.83
RNU1-59P-201ENST00000364829 TRIM26Q12899 539 aaPredicted RBP9.86□□□□□ -0.83
RNU1-59P-201ENST00000364829 PCGF6Q9BYE7 350 aa9.86□□□□□ -0.83
RNU1-59P-201ENST00000364829 RB1CC1Q8TDY2 1594 aa9.82□□□□□ -0.84
RNU1-59P-201ENST00000364829 PELP1Q8IZL8 1130 aaKnown RBP9.8□□□□□ -0.84
RNU1-59P-201ENST00000364829 RSF1Q96T23 1441 aaPredicted RBP9.78□□□□□ -0.84
RNU1-59P-201ENST00000364829 NACADO15069 1562 aa9.72□□□□□ -0.85
RNU1-59P-201ENST00000364829 DCAF8L2P0C7V8 631 aa9.72□□□□□ -0.85
RNU1-59P-201ENST00000364829 SCRIBQ14160 1630 aa9.65□□□□□ -0.86
RNU1-59P-201ENST00000364829 LOC105371045A0A1W2PR82 267 aa9.63□□□□□ -0.87
RNU1-59P-201ENST00000364829 PPARGC1BQ86YN6 1023 aaKnown RBP9.62□□□□□ -0.87
RNU1-59P-201ENST00000364829 TRIM41Q8WV44 630 aa9.61□□□□□ -0.87
RNU1-59P-201ENST00000364829 BAZ1AQ9NRL2 1556 aaPredicted RBP9.6□□□□□ -0.87
RNU1-59P-201ENST00000364829 EIF4G1Q04637 1599 aaKnown RBP9.58□□□□□ -0.88
RNU1-59P-201ENST00000364829 WRNQ14191 1432 aaPredicted RBP eCLIP9.56□□□□□ -0.88
RNU1-59P-201ENST00000364829 EEA1Q15075 1411 aa9.53□□□□□ -0.88
RNU1-59P-201ENST00000364829 MROH2BQ7Z745 1585 aa9.51□□□□□ -0.89
RNU1-59P-201ENST00000364829 TOP2AP11388 1531 aaKnown RBP9.48□□□□□ -0.89
RNU1-59P-201ENST00000364829 MYT1Q01538 1121 aa9.47□□□□□ -0.89
RNU1-59P-201ENST00000364829 CECR2Q9BXF3 1484 aa9.46□□□□□ -0.9
RNU1-59P-201ENST00000364829 WIZO95785 1651 aa9.42□□□□□ -0.9
RNU1-59P-201ENST00000364829 TNIKQ9UKE5 1360 aa9.4□□□□□ -0.9
RNU1-59P-201ENST00000364829 SMARCA4P51532 1647 aa9.38□□□□□ -0.91
RNU1-59P-201ENST00000364829 SCAF1Q9H7N4 1312 aaKnown RBP9.36□□□□□ -0.91
RNU1-59P-201ENST00000364829 SMARCA2P51531 1590 aa9.36□□□□□ -0.91
RNU1-59P-201ENST00000364829 CENPBP07199 599 aaPredicted RBP9.35□□□□□ -0.91
RNU1-59P-201ENST00000364829 PEG3Q9GZU2 1588 aa9.34□□□□□ -0.91
RNU1-59P-201ENST00000364829 CEP162Q5TB80 1403 aa9.34□□□□□ -0.91
RNU1-59P-201ENST00000364829 ACIN1Q9UKV3 1341 aaKnown RBP9.33□□□□□ -0.92
RNU1-59P-201ENST00000364829 GOLGA3Q08378 1498 aa9.33□□□□□ -0.92
RNU1-59P-201ENST00000364829 CCDC88BA6NC98 1476 aa9.31□□□□□ -0.92
RNU1-59P-201ENST00000364829 KIF21BO75037 1637 aa9.31□□□□□ -0.92
RNU1-59P-201ENST00000364829 CCER1Q8TC90 406 aaPredicted RBP9.3□□□□□ -0.92
RNU1-59P-201ENST00000364829 BAZ1BQ9UIG0 1483 aaKnown RBP9.29□□□□□ -0.92
RNU1-59P-201ENST00000364829 FAM9AQ8IZU1 332 aaPredicted RBP9.29□□□□□ -0.92
RNU1-59P-201ENST00000364829 CEP164Q9UPV0 1460 aa9.28□□□□□ -0.92
RNU1-59P-201ENST00000364829 CLSPNQ9HAW4 1339 aa9.27□□□□□ -0.93
RNU1-59P-201ENST00000364829 DIEXFQ68CQ4 756 aaKnown RBP9.24□□□□□ -0.93
RNU1-59P-201ENST00000364829 ABCC8Q09428 1581 aa9.23□□□□□ -0.93
RNU1-59P-201ENST00000364829 CSRNP3Q8WYN3 585 aa9.22□□□□□ -0.93
RNU1-59P-201ENST00000364829 ZNF316A6NFI3 1004 aaPredicted RBP9.19□□□□□ -0.94
RNU1-59P-201ENST00000364829 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.19□□□□□ -0.94
RNU1-59P-201ENST00000364829 SOGA1O94964 1423 aa9.19□□□□□ -0.94
RNU1-59P-201ENST00000364829 VPS8Q8N3P4 1428 aa9.19□□□□□ -0.94
RNU1-59P-201ENST00000364829 NEUROD1Q13562 356 aa9.18□□□□□ -0.94
RNU1-59P-201ENST00000364829 ERICH3Q5RHP9 1530 aa9.16□□□□□ -0.94
RNU1-59P-201ENST00000364829 UNC13AQ9UPW8 1703 aa9.16□□□□□ -0.94
RNU1-59P-201ENST00000364829 CLIP1P30622 1438 aa9.14□□□□□ -0.95
RNU1-59P-201ENST00000364829 GTF3C3Q9Y5Q9 886 aa9.12□□□□□ -0.95
RNU1-59P-201ENST00000364829 SYNJ1O43426 1573 aa9.11□□□□□ -0.95
RNU1-59P-201ENST00000364829 CUX2O14529 1486 aa9.1□□□□□ -0.95
RNU1-59P-201ENST00000364829 TOP2BQ02880 1626 aa9.1□□□□□ -0.95
RNU1-59P-201ENST00000364829 BICRAQ9NZM4 1560 aa9.1□□□□□ -0.95
RNU1-59P-201ENST00000364829 BIVM-ERCC5R4GMW8 1640 aa9.09□□□□□ -0.95
RNU1-59P-201ENST00000364829 UBTFP17480 764 aaKnown RBP9.08□□□□□ -0.96
RNU1-59P-201ENST00000364829 ATAD2BQ9ULI0 1458 aa9.08□□□□□ -0.96
RNU1-59P-201ENST00000364829 RUSC2Q8N2Y8 1516 aa9.07□□□□□ -0.96
RNU1-59P-201ENST00000364829 PRXQ9BXM0 1461 aa9.05□□□□□ -0.96
RNU1-59P-201ENST00000364829 MAP3K1Q13233 1512 aa9.04□□□□□ -0.96
RNU1-59P-201ENST00000364829 RRBP1Q9P2E9 1410 aaKnown RBP9.04□□□□□ -0.96
RNU1-59P-201ENST00000364829 HMGXB3Q12766 1538 aa9.03□□□□□ -0.96
RNU1-59P-201ENST00000364829 APLP2Q06481 763 aa9.02□□□□□ -0.97
RNU1-59P-201ENST00000364829 RAPGEF2Q9Y4G8 1499 aa9.02□□□□□ -0.97
RNU1-59P-201ENST00000364829 EHMT2Q96KQ7 1210 aa9.01□□□□□ -0.97
RNU1-59P-201ENST00000364829 DHX57Q6P158 1386 aaKnown RBP8.99□□□□□ -0.97
RNU1-59P-201ENST00000364829 ARAP1Q96P48 1450 aa8.98□□□□□ -0.97
RNU1-59P-201ENST00000364829 KIF27Q86VH2 1401 aa8.95□□□□□ -0.98
RNU1-59P-201ENST00000364829 NCAPD3P42695 1498 aa8.95□□□□□ -0.98
RNU1-59P-201ENST00000364829 MIER1Q8N108 512 aa8.94□□□□□ -0.98
RNU1-59P-201ENST00000364829 CCNB3Q8WWL7 1395 aa8.91□□□□□ -0.98
RNU1-59P-201ENST00000364829 TIMELESSQ9UNS1 1208 aa8.91□□□□□ -0.98
RNU1-59P-201ENST00000364829 CFTRP13569 1480 aa8.89□□□□□ -0.99
RNU1-59P-201ENST00000364829 PRDM2Q13029 1718 aa8.89□□□□□ -0.99
RNU1-59P-201ENST00000364829 TTBK1Q5TCY1 1321 aaPredicted RBP8.89□□□□□ -0.99
RNU1-59P-201ENST00000364829 HNRNPUL2Q1KMD3 747 aaKnown RBP8.89□□□□□ -0.99
RNU1-59P-201ENST00000364829 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.88□□□□□ -0.99
RNU1-59P-201ENST00000364829 CUX1P39880 1505 aa8.87□□□□□ -0.99
RNU1-59P-201ENST00000364829 ARHGAP35Q9NRY4 1499 aa8.87□□□□□ -0.99
RNU1-59P-201ENST00000364829 TIAM1Q13009 1591 aa8.86□□□□□ -0.99
RNU1-59P-201ENST00000364829 FHAD1B1AJZ9 1412 aa8.86□□□□□ -0.99
RNU1-59P-201ENST00000364829 CFAP43Q8NDM7 1665 aa8.84□□□□□ -0.99
RNU1-59P-201ENST00000364829 AQRO60306 1485 aaKnown RBP eCLIP8.83□□□□□ -1
RNU1-59P-201ENST00000364829 EFCAB5A4FU69 1503 aa8.83□□□□□ -1
RNU1-59P-201ENST00000364829 MAPKBP1O60336 1514 aa8.82□□□□□ -1
RNU1-59P-201ENST00000364829 YTHDC1Q96MU7 727 aaKnown RBP8.82□□□□□ -1
RNU1-59P-201ENST00000364829 SUPT16HQ9Y5B9 1047 aaKnown RBP8.82□□□□□ -1
RNU1-59P-201ENST00000364829 LRRC9Q6ZRR7 1453 aa8.81□□□□□ -1
RNU1-59P-201ENST00000364829 SETD5Q9C0A6 1442 aa8.8□□□□□ -1
RNU1-59P-201ENST00000364829 FYCO1Q9BQS8 1478 aa8.79□□□□□ -1
RNU1-59P-201ENST00000364829 RAB3GAP2Q9H2M9 1393 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms