RNA–Protein interactions for RNA: ENST00000583960.1

SS18L2P2-201, Transcript of SS18 like 2 pseudogene 2, humanhuman

BASIC

Gene SS18L2P2, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L2P2-201ENST00000583960 CHIC1Q5VXU3 224 aa16.38■□□□□ 0.21
SS18L2P2-201ENST00000583960 AEBP2Q6ZN18 517 aaPredicted RBP15.96■□□□□ 0.15
SS18L2P2-201ENST00000583960 PHF23Q9BUL5 403 aaPredicted RBP14.52□□□□□ -0.09
SS18L2P2-201ENST00000583960 PLPPR3Q6T4P5 718 aa13.66□□□□□ -0.22
SS18L2P2-201ENST00000583960 SENP3Q9H4L4 574 aaPredicted RBP13.38□□□□□ -0.27
SS18L2P2-201ENST00000583960 EHMT2Q96KQ7 1210 aa12.92□□□□□ -0.34
SS18L2P2-201ENST00000583960 KCNA4P22459 653 aa12.81□□□□□ -0.36
SS18L2P2-201ENST00000583960 ADRA2BP18089 450 aa12.79□□□□□ -0.36
SS18L2P2-201ENST00000583960 PPP6R1Q9UPN7 881 aa12.55□□□□□ -0.4
SS18L2P2-201ENST00000583960 CSRNP3Q8WYN3 585 aa12.44□□□□□ -0.42
SS18L2P2-201ENST00000583960 FOXD1Q16676 465 aa12.35□□□□□ -0.43
SS18L2P2-201ENST00000583960 SLC4A1APQ9BWU0 796 aaKnown RBP12.34□□□□□ -0.43
SS18L2P2-201ENST00000583960 PPP4R3CPQ6ZMV5 832 aa12.17□□□□□ -0.46
SS18L2P2-201ENST00000583960 NCBP3Q53F19 620 aaKnown RBP12.07□□□□□ -0.48
SS18L2P2-201ENST00000583960 NPM3O75607 178 aaKnown RBP11.89□□□□□ -0.51
SS18L2P2-201ENST00000583960 SLC24A1O60721 1099 aa11.83□□□□□ -0.52
SS18L2P2-201ENST00000583960 PIAS4Q8N2W9 510 aaPredicted RBP11.81□□□□□ -0.52
SS18L2P2-201ENST00000583960 DNAJC5BQ9UF47 199 aa11.8□□□□□ -0.52
SS18L2P2-201ENST00000583960 ZBTB22O15209 634 aa11.79□□□□□ -0.52
SS18L2P2-201ENST00000583960 ABCC9O60706 1549 aa11.7□□□□□ -0.54
SS18L2P2-201ENST00000583960 CNKSR2Q8WXI2 1034 aa11.63□□□□□ -0.55
SS18L2P2-201ENST00000583960 RTN4Q9NQC3 1192 aaKnown RBP11.63□□□□□ -0.55
SS18L2P2-201ENST00000583960 AMER1Q5JTC6 1135 aaPredicted RBP11.61□□□□□ -0.55
SS18L2P2-201ENST00000583960 FOXD4L1Q9NU39 408 aa11.53□□□□□ -0.56
SS18L2P2-201ENST00000583960 SCAF1Q9H7N4 1312 aaKnown RBP11.49□□□□□ -0.57
SS18L2P2-201ENST00000583960 NISCHQ9Y2I1 1504 aa11.46□□□□□ -0.57
SS18L2P2-201ENST00000583960 DNAJC5Q9H3Z4 198 aa11.44□□□□□ -0.58
SS18L2P2-201ENST00000583960 MAPK8IP2Q13387 824 aaPredicted RBP11.19□□□□□ -0.62
SS18L2P2-201ENST00000583960 RNF216Q9NWF9 866 aaPredicted RBP11.19□□□□□ -0.62
SS18L2P2-201ENST00000583960 FKBP8Q14318 412 aa11.17□□□□□ -0.62
SS18L2P2-201ENST00000583960 ATXN8OSP0DMR3 200 aa11.07□□□□□ -0.64
SS18L2P2-201ENST00000583960 SLC4A2P04920 1241 aa11.05□□□□□ -0.64
SS18L2P2-201ENST00000583960 MSH5O43196 834 aa11.02□□□□□ -0.65
SS18L2P2-201ENST00000583960 MYCNP04198 464 aaPredicted RBP10.95□□□□□ -0.66
SS18L2P2-201ENST00000583960 HOXD11P31277 338 aaPredicted RBP10.94□□□□□ -0.66
SS18L2P2-201ENST00000583960 PABPN1Q86U42 306 aaKnown RBP eCLIP10.88□□□□□ -0.67
SS18L2P2-201ENST00000583960 DMRT2Q9Y5R5 561 aa10.82□□□□□ -0.68
SS18L2P2-201ENST00000583960 TRIM41Q8WV44 630 aa10.78□□□□□ -0.68
SS18L2P2-201ENST00000583960 PLCB2Q00722 1185 aa10.69□□□□□ -0.7
SS18L2P2-201ENST00000583960 ATF5Q9Y2D1 282 aaPredicted RBP10.64□□□□□ -0.71
SS18L2P2-201ENST00000583960 CECR2Q9BXF3 1484 aa10.58□□□□□ -0.72
SS18L2P2-201ENST00000583960 RB1CC1Q8TDY2 1594 aa10.56□□□□□ -0.72
SS18L2P2-201ENST00000583960 HAP1P54257 671 aaPredicted RBP10.54□□□□□ -0.72
SS18L2P2-201ENST00000583960 FBXO3Q9UK99 471 aa10.54□□□□□ -0.72
SS18L2P2-201ENST00000583960 BCANQ96GW7 911 aa10.52□□□□□ -0.73
SS18L2P2-201ENST00000583960 PRKCSHP14314 528 aaPredicted RBP10.49□□□□□ -0.73
SS18L2P2-201ENST00000583960 DCAF8L2P0C7V8 631 aa10.48□□□□□ -0.73
SS18L2P2-201ENST00000583960 CCDC180Q9P1Z9 1646 aa10.47□□□□□ -0.73
SS18L2P2-201ENST00000583960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.47□□□□□ -0.73
SS18L2P2-201ENST00000583960 HNRNPUL2Q1KMD3 747 aaKnown RBP10.47□□□□□ -0.73
SS18L2P2-201ENST00000583960 SAMD1Q6SPF0 538 aaPredicted RBP10.47□□□□□ -0.73
SS18L2P2-201ENST00000583960 VSIG10Q8N0Z9 540 aa10.43□□□□□ -0.74
SS18L2P2-201ENST00000583960 TAOK2Q9UL54 1235 aa10.43□□□□□ -0.74
SS18L2P2-201ENST00000583960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.42□□□□□ -0.74
SS18L2P2-201ENST00000583960 SPDYE4A6NLX3 237 aa10.37□□□□□ -0.75
SS18L2P2-201ENST00000583960 CC2D2AQ9P2K1 1620 aa10.36□□□□□ -0.75
SS18L2P2-201ENST00000583960 VASPP50552 380 aaPredicted RBP10.36□□□□□ -0.75
SS18L2P2-201ENST00000583960 ZNF219Q9P2Y4 722 aaPredicted RBP10.35□□□□□ -0.75
SS18L2P2-201ENST00000583960 U3KPZ7 1027 aaPredicted RBP10.34□□□□□ -0.75
SS18L2P2-201ENST00000583960 DCAF8L1A6NGE4 600 aa10.31□□□□□ -0.76
SS18L2P2-201ENST00000583960 IFNLR1Q8IU57 520 aaPredicted RBP10.31□□□□□ -0.76
SS18L2P2-201ENST00000583960 PROM2Q8N271 834 aa10.31□□□□□ -0.76
SS18L2P2-201ENST00000583960 CUX2O14529 1486 aa10.3□□□□□ -0.76
SS18L2P2-201ENST00000583960 PKD2Q13563 968 aa10.28□□□□□ -0.76
SS18L2P2-201ENST00000583960 TPRNQ4KMQ1 711 aa10.26□□□□□ -0.77
SS18L2P2-201ENST00000583960 BICRAQ9NZM4 1560 aa10.25□□□□□ -0.77
SS18L2P2-201ENST00000583960 NACADO15069 1562 aa10.23□□□□□ -0.77
SS18L2P2-201ENST00000583960 KDM2AQ9Y2K7 1162 aa10.23□□□□□ -0.77
SS18L2P2-201ENST00000583960 MKRN4PQ13434 485 aaPredicted RBP10.2□□□□□ -0.78
SS18L2P2-201ENST00000583960 BBXQ8WY36 941 aaPredicted RBP10.2□□□□□ -0.78
SS18L2P2-201ENST00000583960 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.2□□□□□ -0.78
SS18L2P2-201ENST00000583960 ERCC6Q03468 1493 aa10.17□□□□□ -0.78
SS18L2P2-201ENST00000583960 APLP2Q06481 763 aa10.16□□□□□ -0.78
SS18L2P2-201ENST00000583960 FBLN2P98095 1184 aa10.15□□□□□ -0.78
SS18L2P2-201ENST00000583960 PAXIP1Q6ZW49 1069 aaPredicted RBP10.14□□□□□ -0.79
SS18L2P2-201ENST00000583960 UNC13AQ9UPW8 1703 aa10.13□□□□□ -0.79
SS18L2P2-201ENST00000583960 EIF4G1Q04637 1599 aaKnown RBP10.12□□□□□ -0.79
SS18L2P2-201ENST00000583960 NPM1P06748 294 aaKnown RBP eCLIP10.11□□□□□ -0.79
SS18L2P2-201ENST00000583960 CFAP44Q96MT7 982 aa10.11□□□□□ -0.79
SS18L2P2-201ENST00000583960 ECM2O94769 699 aaPredicted RBP10.07□□□□□ -0.8
SS18L2P2-201ENST00000583960 ILDR1Q86SU0 546 aaPredicted RBP10.06□□□□□ -0.8
SS18L2P2-201ENST00000583960 SPOCK2Q92563 424 aa10.04□□□□□ -0.8
SS18L2P2-201ENST00000583960 TRHP20396 242 aaPredicted RBP10.03□□□□□ -0.8
SS18L2P2-201ENST00000583960 KLHL34Q8N239 644 aa10.02□□□□□ -0.81
SS18L2P2-201ENST00000583960 SPRYD3Q8NCJ5 442 aa10.02□□□□□ -0.81
SS18L2P2-201ENST00000583960 TSHZ2Q9NRE2 1034 aa10□□□□□ -0.81
SS18L2P2-201ENST00000583960 RGL2O15211 777 aa9.94□□□□□ -0.82
SS18L2P2-201ENST00000583960 POLA2Q14181 598 aa9.93□□□□□ -0.82
SS18L2P2-201ENST00000583960 SHROOM4Q9ULL8 1493 aa9.92□□□□□ -0.82
SS18L2P2-201ENST00000583960 NBR1Q14596 966 aa9.88□□□□□ -0.83
SS18L2P2-201ENST00000583960 TIMELESSQ9UNS1 1208 aa9.88□□□□□ -0.83
SS18L2P2-201ENST00000583960 OSCARQ8IYS5 282 aa9.86□□□□□ -0.83
SS18L2P2-201ENST00000583960 STAG3Q9UJ98 1225 aa9.86□□□□□ -0.83
SS18L2P2-201ENST00000583960 TULP1O00294 542 aaPredicted RBP9.85□□□□□ -0.83
SS18L2P2-201ENST00000583960 CHGAP10645 457 aaKnown RBP9.84□□□□□ -0.83
SS18L2P2-201ENST00000583960 GTF3C3Q9Y5Q9 886 aa9.84□□□□□ -0.83
SS18L2P2-201ENST00000583960 PLCD3Q8N3E9 789 aa9.82□□□□□ -0.84
SS18L2P2-201ENST00000583960 SPINK5Q9NQ38 1064 aaPredicted RBP9.81□□□□□ -0.84
SS18L2P2-201ENST00000583960 SCRIBQ14160 1630 aa9.81□□□□□ -0.84
SS18L2P2-201ENST00000583960 CYB5RLQ6IPT4 315 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms