RNA–Protein interactions for RNA: ENST00000365459.1

RNU6-609P-201, Transcript of RNA, U6 small nuclear 609, pseudogene, humanhuman

BASIC

Gene RNU6-609P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-609P-201ENST00000365459 AEBP2Q6ZN18 517 aaPredicted RBP25.77■■□□□ 1.72
RNU6-609P-201ENST00000365459 CHIC1Q5VXU3 224 aa25.35■■□□□ 1.65
RNU6-609P-201ENST00000365459 PHF23Q9BUL5 403 aaPredicted RBP22.45■■□□□ 1.18
RNU6-609P-201ENST00000365459 SENP3Q9H4L4 574 aaPredicted RBP21.6■■□□□ 1.05
RNU6-609P-201ENST00000365459 PLPPR3Q6T4P5 718 aa20.64■□□□□ 0.89
RNU6-609P-201ENST00000365459 FOXD1Q16676 465 aa20.15■□□□□ 0.82
RNU6-609P-201ENST00000365459 PPP6R1Q9UPN7 881 aa19.72■□□□□ 0.75
RNU6-609P-201ENST00000365459 ADRA2BP18089 450 aa19.7■□□□□ 0.74
RNU6-609P-201ENST00000365459 PIAS4Q8N2W9 510 aaPredicted RBP19.02■□□□□ 0.64
RNU6-609P-201ENST00000365459 KCNA4P22459 653 aa18.36■□□□□ 0.53
RNU6-609P-201ENST00000365459 PPP4R3CPQ6ZMV5 832 aa18.32■□□□□ 0.52
RNU6-609P-201ENST00000365459 MSH5O43196 834 aa18.27■□□□□ 0.52
RNU6-609P-201ENST00000365459 MAPK8IP2Q13387 824 aaPredicted RBP17.81■□□□□ 0.44
RNU6-609P-201ENST00000365459 NCBP3Q53F19 620 aaKnown RBP17.78■□□□□ 0.44
RNU6-609P-201ENST00000365459 SCAF1Q9H7N4 1312 aaKnown RBP17.74■□□□□ 0.43
RNU6-609P-201ENST00000365459 NPM3O75607 178 aaKnown RBP17.7■□□□□ 0.42
RNU6-609P-201ENST00000365459 CNKSR2Q8WXI2 1034 aa17.66■□□□□ 0.42
RNU6-609P-201ENST00000365459 SLC4A1APQ9BWU0 796 aaKnown RBP17.44■□□□□ 0.38
RNU6-609P-201ENST00000365459 EHMT2Q96KQ7 1210 aa17.42■□□□□ 0.38
RNU6-609P-201ENST00000365459 DMRT2Q9Y5R5 561 aa17.35■□□□□ 0.37
RNU6-609P-201ENST00000365459 RNF216Q9NWF9 866 aaPredicted RBP17.22■□□□□ 0.35
RNU6-609P-201ENST00000365459 HOXD11P31277 338 aaPredicted RBP17.1■□□□□ 0.33
RNU6-609P-201ENST00000365459 CSRNP3Q8WYN3 585 aa17.06■□□□□ 0.32
RNU6-609P-201ENST00000365459 DNAJC5BQ9UF47 199 aa16.98■□□□□ 0.31
RNU6-609P-201ENST00000365459 ZBTB22O15209 634 aa16.96■□□□□ 0.31
RNU6-609P-201ENST00000365459 SLC4A2P04920 1241 aa16.69■□□□□ 0.26
RNU6-609P-201ENST00000365459 FOXD4L1Q9NU39 408 aa16.67■□□□□ 0.26
RNU6-609P-201ENST00000365459 DCAF8L1A6NGE4 600 aa16.61■□□□□ 0.25
RNU6-609P-201ENST00000365459 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.29■□□□□ 0.2
RNU6-609P-201ENST00000365459 MYCNP04198 464 aaPredicted RBP16.26■□□□□ 0.19
RNU6-609P-201ENST00000365459 POTEDQ86YR6 584 aa16.22■□□□□ 0.19
RNU6-609P-201ENST00000365459 U3KPZ7 1027 aaPredicted RBP16.15■□□□□ 0.18
RNU6-609P-201ENST00000365459 ATF5Q9Y2D1 282 aaPredicted RBP15.99■□□□□ 0.15
RNU6-609P-201ENST00000365459 ATXN8OSP0DMR3 200 aa15.98■□□□□ 0.15
RNU6-609P-201ENST00000365459 SAMD1Q6SPF0 538 aaPredicted RBP15.85■□□□□ 0.13
RNU6-609P-201ENST00000365459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.82■□□□□ 0.12
RNU6-609P-201ENST00000365459 HNRNPUL2Q1KMD3 747 aaKnown RBP15.82■□□□□ 0.12
RNU6-609P-201ENST00000365459 RNF39Q9H2S5 420 aa15.79■□□□□ 0.12
RNU6-609P-201ENST00000365459 SPINK5Q9NQ38 1064 aaPredicted RBP15.65■□□□□ 0.1
RNU6-609P-201ENST00000365459 ZNF219Q9P2Y4 722 aaPredicted RBP15.56■□□□□ 0.08
RNU6-609P-201ENST00000365459 APLP2Q06481 763 aa15.53■□□□□ 0.08
RNU6-609P-201ENST00000365459 C1QBPQ07021 282 aaKnown RBP15.52■□□□□ 0.08
RNU6-609P-201ENST00000365459 TRHP20396 242 aaPredicted RBP15.51■□□□□ 0.07
RNU6-609P-201ENST00000365459 CAPN15O75808 1086 aa15.47■□□□□ 0.07
RNU6-609P-201ENST00000365459 FKBP8Q14318 412 aa15.36■□□□□ 0.05
RNU6-609P-201ENST00000365459 POLA2Q14181 598 aa15.31■□□□□ 0.04
RNU6-609P-201ENST00000365459 ABCB7O75027 752 aa15.3■□□□□ 0.04
RNU6-609P-201ENST00000365459 MKRN4PQ13434 485 aaPredicted RBP15.28■□□□□ 0.04
RNU6-609P-201ENST00000365459 DSG3P32926 999 aa15.16■□□□□ 0.02
RNU6-609P-201ENST00000365459 CACNB1Q02641 598 aaPredicted RBP15.12■□□□□ 0.01
RNU6-609P-201ENST00000365459 FBLN2P98095 1184 aa15.06■□□□□ 0
RNU6-609P-201ENST00000365459 SPDYE4A6NLX3 237 aa14.98□□□□□ -0.01
RNU6-609P-201ENST00000365459 ZBTB12Q9Y330 459 aaPredicted RBP14.91□□□□□ -0.02
RNU6-609P-201ENST00000365459 OSCARQ8IYS5 282 aa14.83□□□□□ -0.04
RNU6-609P-201ENST00000365459 PROM2Q8N271 834 aa14.8□□□□□ -0.04
RNU6-609P-201ENST00000365459 ZNF692Q9BU19 519 aaPredicted RBP14.65□□□□□ -0.06
RNU6-609P-201ENST00000365459 SPDYE2BA6NHP3 402 aa14.62□□□□□ -0.07
RNU6-609P-201ENST00000365459 SPDYE6P0CI01 402 aa14.62□□□□□ -0.07
RNU6-609P-201ENST00000365459 SPDYE2Q495Y8 402 aa14.62□□□□□ -0.07
RNU6-609P-201ENST00000365459 RTN4Q9NQC3 1192 aaKnown RBP14.62□□□□□ -0.07
RNU6-609P-201ENST00000365459 SSUH2Q9Y2M2 353 aa14.61□□□□□ -0.07
RNU6-609P-201ENST00000365459 FBXO3Q9UK99 471 aa14.54□□□□□ -0.08
RNU6-609P-201ENST00000365459 PABPN1Q86U42 306 aaKnown RBP eCLIP14.52□□□□□ -0.09
RNU6-609P-201ENST00000365459 VASPP50552 380 aaPredicted RBP14.49□□□□□ -0.09
RNU6-609P-201ENST00000365459 AMER1Q5JTC6 1135 aaPredicted RBP14.46□□□□□ -0.09
RNU6-609P-201ENST00000365459 IFNLR1Q8IU57 520 aaPredicted RBP14.37□□□□□ -0.11
RNU6-609P-201ENST00000365459 RBM42Q9BTD8 480 aaKnown RBP14.27□□□□□ -0.13
RNU6-609P-201ENST00000365459 AKT1S1Q96B36 256 aa14.24□□□□□ -0.13
RNU6-609P-201ENST00000365459 STAG3Q9UJ98 1225 aa14.23□□□□□ -0.13
RNU6-609P-201ENST00000365459 REM2Q8IYK8 340 aaPredicted RBP14.18□□□□□ -0.14
RNU6-609P-201ENST00000365459 MIER1Q8N108 512 aa14.15□□□□□ -0.14
RNU6-609P-201ENST00000365459 PLCD3Q8N3E9 789 aa14.15□□□□□ -0.14
RNU6-609P-201ENST00000365459 KLHL34Q8N239 644 aa14.12□□□□□ -0.15
RNU6-609P-201ENST00000365459 SPDYE1Q8NFV5 336 aaPredicted RBP14.11□□□□□ -0.15
RNU6-609P-201ENST00000365459 CLEC11AQ9Y240 323 aa14.11□□□□□ -0.15
RNU6-609P-201ENST00000365459 PITPNM1O00562 1244 aa14.05□□□□□ -0.16
RNU6-609P-201ENST00000365459 SPOCK2Q92563 424 aa14.04□□□□□ -0.16
RNU6-609P-201ENST00000365459 PKD2Q13563 968 aa14.02□□□□□ -0.17
RNU6-609P-201ENST00000365459 PRR29P0C7W0 189 aa13.97□□□□□ -0.17
RNU6-609P-201ENST00000365459 CREBZFQ9NS37 354 aa13.97□□□□□ -0.17
RNU6-609P-201ENST00000365459 PLEKHG5O94827 1062 aa13.89□□□□□ -0.19
RNU6-609P-201ENST00000365459 MNX1P50219 401 aaPredicted RBP13.88□□□□□ -0.19
RNU6-609P-201ENST00000365459 ZBTB47Q9UFB7 747 aaPredicted RBP13.83□□□□□ -0.2
RNU6-609P-201ENST00000365459 NUBP1P53384 320 aa13.82□□□□□ -0.2
RNU6-609P-201ENST00000365459 CHADLQ6NUI6 762 aa13.82□□□□□ -0.2
RNU6-609P-201ENST00000365459 ECM2O94769 699 aaPredicted RBP13.81□□□□□ -0.2
RNU6-609P-201ENST00000365459 CIZ1Q9ULV3 898 aaPredicted RBP13.81□□□□□ -0.2
RNU6-609P-201ENST00000365459 DCAF8L2P0C7V8 631 aa13.76□□□□□ -0.21
RNU6-609P-201ENST00000365459 RGL2O15211 777 aa13.75□□□□□ -0.21
RNU6-609P-201ENST00000365459 RASEFQ8IZ41 740 aa13.72□□□□□ -0.21
RNU6-609P-201ENST00000365459 FXR2P51116 673 aaKnown RBP eCLIP13.67□□□□□ -0.22
RNU6-609P-201ENST00000365459 CHRDL2Q6WN34 429 aa13.67□□□□□ -0.22
RNU6-609P-201ENST00000365459 PRKAR2AP13861 404 aaKnown RBP13.66□□□□□ -0.22
RNU6-609P-201ENST00000365459 DCAF8Q5TAQ9 597 aa13.66□□□□□ -0.22
RNU6-609P-201ENST00000365459 SLC24A1O60721 1099 aa13.64□□□□□ -0.23
RNU6-609P-201ENST00000365459 FARP1Q9Y4F1 1045 aaPredicted RBP13.63□□□□□ -0.23
RNU6-609P-201ENST00000365459 NPM1P06748 294 aaKnown RBP eCLIP13.62□□□□□ -0.23
RNU6-609P-201ENST00000365459 PIP4P2Q8N4L2 257 aa13.62□□□□□ -0.23
RNU6-609P-201ENST00000365459 GSE1Q14687 1217 aa13.61□□□□□ -0.23
RNU6-609P-201ENST00000365459 RNF25Q96BH1 459 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms