RNA–Protein interactions for RNA: ENST00000564872.1

LINC01904-201, Transcript of long intergenic non-protein coding RNA 1904, humanhuman

TSL 1 (best) BASIC

Gene LINC01904, Length 861 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01904-201ENST00000564872 AEBP2Q6ZN18 517 aaPredicted RBP21.96■■□□□ 1.11
LINC01904-201ENST00000564872 CHIC1Q5VXU3 224 aa20.89■□□□□ 0.93
LINC01904-201ENST00000564872 SENP3Q9H4L4 574 aaPredicted RBP18.73■□□□□ 0.59
LINC01904-201ENST00000564872 PHF23Q9BUL5 403 aaPredicted RBP18.5■□□□□ 0.55
LINC01904-201ENST00000564872 FOXD1Q16676 465 aa17.45■□□□□ 0.38
LINC01904-201ENST00000564872 PLPPR3Q6T4P5 718 aa16.7■□□□□ 0.26
LINC01904-201ENST00000564872 PPP6R1Q9UPN7 881 aa16.34■□□□□ 0.21
LINC01904-201ENST00000564872 MSH5O43196 834 aa16.33■□□□□ 0.2
LINC01904-201ENST00000564872 PIAS4Q8N2W9 510 aaPredicted RBP16.29■□□□□ 0.2
LINC01904-201ENST00000564872 ADRA2BP18089 450 aa16.28■□□□□ 0.2
LINC01904-201ENST00000564872 POTEDQ86YR6 584 aa15.88■□□□□ 0.13
LINC01904-201ENST00000564872 MAPK8IP2Q13387 824 aaPredicted RBP14.95□□□□□ -0.02
LINC01904-201ENST00000564872 SCAF1Q9H7N4 1312 aaKnown RBP14.92□□□□□ -0.02
LINC01904-201ENST00000564872 DMRT2Q9Y5R5 561 aa14.87□□□□□ -0.03
LINC01904-201ENST00000564872 PPP4R3CPQ6ZMV5 832 aa14.64□□□□□ -0.07
LINC01904-201ENST00000564872 CNKSR2Q8WXI2 1034 aa14.36□□□□□ -0.11
LINC01904-201ENST00000564872 HOXD11P31277 338 aaPredicted RBP14.34□□□□□ -0.11
LINC01904-201ENST00000564872 RNF216Q9NWF9 866 aaPredicted RBP14.23□□□□□ -0.13
LINC01904-201ENST00000564872 DCAF8L1A6NGE4 600 aa14.21□□□□□ -0.13
LINC01904-201ENST00000564872 NCBP3Q53F19 620 aaKnown RBP14.09□□□□□ -0.15
LINC01904-201ENST00000564872 CACNB1Q02641 598 aaPredicted RBP13.98□□□□□ -0.17
LINC01904-201ENST00000564872 RNF39Q9H2S5 420 aa13.94□□□□□ -0.18
LINC01904-201ENST00000564872 NPM3O75607 178 aaKnown RBP13.88□□□□□ -0.19
LINC01904-201ENST00000564872 DNAJC5BQ9UF47 199 aa13.87□□□□□ -0.19
LINC01904-201ENST00000564872 C1QBPQ07021 282 aaKnown RBP13.75□□□□□ -0.21
LINC01904-201ENST00000564872 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.64□□□□□ -0.23
LINC01904-201ENST00000564872 KCNA4P22459 653 aa13.63□□□□□ -0.23
LINC01904-201ENST00000564872 U3KPZ7 1027 aaPredicted RBP13.36□□□□□ -0.27
LINC01904-201ENST00000564872 SLC4A2P04920 1241 aa13.26□□□□□ -0.29
LINC01904-201ENST00000564872 SPINK5Q9NQ38 1064 aaPredicted RBP13.15□□□□□ -0.3
LINC01904-201ENST00000564872 CAPN15O75808 1086 aa13.12□□□□□ -0.31
LINC01904-201ENST00000564872 NISCHQ9Y2I1 1504 aa13.07□□□□□ -0.32
LINC01904-201ENST00000564872 DSG3P32926 999 aa13.06□□□□□ -0.32
LINC01904-201ENST00000564872 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.01□□□□□ -0.33
LINC01904-201ENST00000564872 HNRNPUL2Q1KMD3 747 aaKnown RBP13.01□□□□□ -0.33
LINC01904-201ENST00000564872 APLP2Q06481 763 aa13□□□□□ -0.33
LINC01904-201ENST00000564872 SAMD1Q6SPF0 538 aaPredicted RBP12.93□□□□□ -0.34
LINC01904-201ENST00000564872 TRHP20396 242 aaPredicted RBP12.92□□□□□ -0.34
LINC01904-201ENST00000564872 ZNF219Q9P2Y4 722 aaPredicted RBP12.91□□□□□ -0.34
LINC01904-201ENST00000564872 SLC4A1APQ9BWU0 796 aaKnown RBP12.87□□□□□ -0.35
LINC01904-201ENST00000564872 MYCNP04198 464 aaPredicted RBP12.83□□□□□ -0.36
LINC01904-201ENST00000564872 ABCB7O75027 752 aa12.8□□□□□ -0.36
LINC01904-201ENST00000564872 FOXD4L1Q9NU39 408 aa12.71□□□□□ -0.37
LINC01904-201ENST00000564872 POLA2Q14181 598 aa12.59□□□□□ -0.39
LINC01904-201ENST00000564872 ZBTB22O15209 634 aa12.53□□□□□ -0.4
LINC01904-201ENST00000564872 ATF5Q9Y2D1 282 aaPredicted RBP12.53□□□□□ -0.4
LINC01904-201ENST00000564872 RBM42Q9BTD8 480 aaKnown RBP12.46□□□□□ -0.41
LINC01904-201ENST00000564872 POTEHQ6S545 545 aa12.45□□□□□ -0.42
LINC01904-201ENST00000564872 ATXN8OSP0DMR3 200 aa12.35□□□□□ -0.43
LINC01904-201ENST00000564872 ZBTB12Q9Y330 459 aaPredicted RBP12.35□□□□□ -0.43
LINC01904-201ENST00000564872 AKT1S1Q96B36 256 aa12.19□□□□□ -0.46
LINC01904-201ENST00000564872 CHRDL2Q6WN34 429 aa12.17□□□□□ -0.46
LINC01904-201ENST00000564872 OSCARQ8IYS5 282 aa12.17□□□□□ -0.46
LINC01904-201ENST00000564872 REM2Q8IYK8 340 aaPredicted RBP12.07□□□□□ -0.48
LINC01904-201ENST00000564872 FBLN2P98095 1184 aa12.05□□□□□ -0.48
LINC01904-201ENST00000564872 CSRNP3Q8WYN3 585 aa11.99□□□□□ -0.49
LINC01904-201ENST00000564872 SPDYE2BA6NHP3 402 aa11.97□□□□□ -0.49
LINC01904-201ENST00000564872 SPDYE6P0CI01 402 aa11.97□□□□□ -0.49
LINC01904-201ENST00000564872 SPDYE2Q495Y8 402 aa11.97□□□□□ -0.49
LINC01904-201ENST00000564872 MKRN4PQ13434 485 aaPredicted RBP11.96□□□□□ -0.49
LINC01904-201ENST00000564872 PITPNM1O00562 1244 aa11.92□□□□□ -0.5
LINC01904-201ENST00000564872 PIP4P2Q8N4L2 257 aa11.89□□□□□ -0.51
LINC01904-201ENST00000564872 FXR2P51116 673 aaKnown RBP eCLIP11.84□□□□□ -0.51
LINC01904-201ENST00000564872 ZNF692Q9BU19 519 aaPredicted RBP11.82□□□□□ -0.52
LINC01904-201ENST00000564872 SSUH2Q9Y2M2 353 aa11.81□□□□□ -0.52
LINC01904-201ENST00000564872 EHMT2Q96KQ7 1210 aa11.8□□□□□ -0.52
LINC01904-201ENST00000564872 SPDYE1Q8NFV5 336 aaPredicted RBP11.75□□□□□ -0.53
LINC01904-201ENST00000564872 CLEC11AQ9Y240 323 aa11.7□□□□□ -0.54
LINC01904-201ENST00000564872 SP7Q8TDD2 431 aaPredicted RBP11.69□□□□□ -0.54
LINC01904-201ENST00000564872 HAX1O00165 279 aa11.66□□□□□ -0.54
LINC01904-201ENST00000564872 PABPN1Q86U42 306 aaKnown RBP eCLIP11.64□□□□□ -0.55
LINC01904-201ENST00000564872 PRKAR2AP13861 404 aaKnown RBP11.62□□□□□ -0.55
LINC01904-201ENST00000564872 CCDC180Q9P1Z9 1646 aa11.53□□□□□ -0.56
LINC01904-201ENST00000564872 PRR29P0C7W0 189 aa11.53□□□□□ -0.56
LINC01904-201ENST00000564872 EVX2Q03828 476 aa11.52□□□□□ -0.57
LINC01904-201ENST00000564872 CHADLQ6NUI6 762 aa11.48□□□□□ -0.57
LINC01904-201ENST00000564872 C19orf67A6NJJ6 358 aa11.45□□□□□ -0.58
LINC01904-201ENST00000564872 SPDYE4A6NLX3 237 aa11.41□□□□□ -0.58
LINC01904-201ENST00000564872 STAG3Q9UJ98 1225 aa11.35□□□□□ -0.59
LINC01904-201ENST00000564872 FARP1Q9Y4F1 1045 aaPredicted RBP11.34□□□□□ -0.59
LINC01904-201ENST00000564872 ABCC9O60706 1549 aa11.29□□□□□ -0.6
LINC01904-201ENST00000564872 GABBR2O75899 941 aa11.27□□□□□ -0.61
LINC01904-201ENST00000564872 CREBZFQ9NS37 354 aa11.26□□□□□ -0.61
LINC01904-201ENST00000564872 CD44P16070 742 aaKnown RBP11.25□□□□□ -0.61
LINC01904-201ENST00000564872 PROM2Q8N271 834 aa11.16□□□□□ -0.62
LINC01904-201ENST00000564872 CLCN6P51797 869 aa11.14□□□□□ -0.63
LINC01904-201ENST00000564872 ZNF579Q8NAF0 562 aaKnown RBP11.09□□□□□ -0.63
LINC01904-201ENST00000564872 ZRANB1Q9UGI0 708 aa11.09□□□□□ -0.63
LINC01904-201ENST00000564872 MNX1P50219 401 aaPredicted RBP11.08□□□□□ -0.64
LINC01904-201ENST00000564872 NPM1P06748 294 aaKnown RBP eCLIP11.05□□□□□ -0.64
LINC01904-201ENST00000564872 POTEIP0CG38 1075 aa11.03□□□□□ -0.64
LINC01904-201ENST00000564872 PAK3O75914 559 aaPredicted RBP11.01□□□□□ -0.65
LINC01904-201ENST00000564872 DCAF8L2P0C7V8 631 aa11.01□□□□□ -0.65
LINC01904-201ENST00000564872 LHX8Q68G74 356 aa10.96□□□□□ -0.65
LINC01904-201ENST00000564872 DCBLD2Q96PD2 775 aa10.96□□□□□ -0.65
LINC01904-201ENST00000564872 GALR2O43603 387 aaPredicted RBP10.94□□□□□ -0.66
LINC01904-201ENST00000564872 PHF12Q96QT6 1004 aa10.93□□□□□ -0.66
LINC01904-201ENST00000564872 ZCCHC6Q5VYS8 1495 aaKnown RBP10.9□□□□□ -0.66
LINC01904-201ENST00000564872 MIER1Q8N108 512 aa10.89□□□□□ -0.67
LINC01904-201ENST00000564872 PLEKHG5O94827 1062 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms