Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 UBE2NP1-201ENST00000545592 458 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 SETP2-201ENST00000553886 926 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AL163153.1-201ENST00000554223 283 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AL132640.2-202ENST00000559732 614 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 IGHV1OR15-3-201ENST00000564926 351 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC005668.1-201ENST00000571142 476 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 TVP23CP2-201ENST00000571473 623 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 MIR3613-201ENST00000579844 87 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 MIR378H-201ENST00000579966 83 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 MIR1273F-201ENST00000580581 99 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 EIF1P5-201ENST00000585002 234 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 OR7D1P-201ENST00000592739 933 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 OR7A8P-201ENST00000595427 913 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC009779.6-201ENST00000603972 165 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AP001554.1-201ENST00000604533 376 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC007363.1-201ENST00000604736 620 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AL136139.1-201ENST00000605568 222 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AL096855.2-201ENST00000605785 369 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC122710.3-201ENST00000606566 541 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC012360.2-201ENST00000609349 391 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AL445423.1-201ENST00000609941 536 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 PTCHD3P1-201ENST00000612350 537 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AL606760.4-201ENST00000617613 718 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AL133370.2-201ENST00000619934 439 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC244517.12-201ENST00000623581 663 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC021753.1-201ENST00000635724 168 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 ENSA-215ENST00000638926 360 ntTSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 OR52H1-202ENST00000641796 1061 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 SCAF11-205ENST00000465950 5296 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 TENM2-205ENST00000519204 9427 ntTSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 RARSP1-201ENST00000542842 1418 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 SP140-204ENST00000417495 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 SLC2A3P4-201ENST00000521259 1471 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 ERVFRD-3-201ENST00000578561 1617 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 PBLD-202ENST00000309049 2165 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 ACSL1-211ENST00000515030 3948 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 ATMIN-206ENST00000566488 5343 ntTSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms