RNA–Protein interactions for RNA: ENST00000560364.5

ZHX3-218, Transcript of zinc fingers and homeoboxes 3, humanhuman

TSL 5 BASIC

Gene ZHX3, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZHX3-218ENST00000560364 DCAF8L2P0C7V8 631 aa14.31□□□□□ -0.12
ZHX3-218ENST00000560364 NISCHQ9Y2I1 1504 aa14.18□□□□□ -0.14
ZHX3-218ENST00000560364 PELP1Q8IZL8 1130 aaKnown RBP13.76□□□□□ -0.21
ZHX3-218ENST00000560364 SUPT5HO00267 1087 aaKnown RBP13.58□□□□□ -0.24
ZHX3-218ENST00000560364 HRCP23327 699 aa13.53□□□□□ -0.24
ZHX3-218ENST00000560364 SHROOM4Q9ULL8 1493 aa13.49□□□□□ -0.25
ZHX3-218ENST00000560364 PPARGC1BQ86YN6 1023 aaKnown RBP13.47□□□□□ -0.25
ZHX3-218ENST00000560364 MYT1Q01538 1121 aa13.35□□□□□ -0.27
ZHX3-218ENST00000560364 PCGF6Q9BYE7 350 aa13.35□□□□□ -0.27
ZHX3-218ENST00000560364 SCAF1Q9H7N4 1312 aaKnown RBP13.09□□□□□ -0.31
ZHX3-218ENST00000560364 EHMT2Q96KQ7 1210 aa13.04□□□□□ -0.32
ZHX3-218ENST00000560364 FAM9AQ8IZU1 332 aaPredicted RBP12.78□□□□□ -0.36
ZHX3-218ENST00000560364 GTF3C3Q9Y5Q9 886 aa12.74□□□□□ -0.37
ZHX3-218ENST00000560364 ACIN1Q9UKV3 1341 aaKnown RBP12.66□□□□□ -0.38
ZHX3-218ENST00000560364 NEUROD1Q13562 356 aa12.65□□□□□ -0.38
ZHX3-218ENST00000560364 CENPBP07199 599 aaPredicted RBP12.65□□□□□ -0.39
ZHX3-218ENST00000560364 ZEB1P37275 1124 aaPredicted RBP12.6□□□□□ -0.39
ZHX3-218ENST00000560364 TRIM26Q12899 539 aaPredicted RBP12.56□□□□□ -0.4
ZHX3-218ENST00000560364 TTBK1Q5TCY1 1321 aaPredicted RBP12.55□□□□□ -0.4
ZHX3-218ENST00000560364 BCL11AQ9H165 835 aa12.55□□□□□ -0.4
ZHX3-218ENST00000560364 APLP2Q06481 763 aa12.54□□□□□ -0.4
ZHX3-218ENST00000560364 TRIM41Q8WV44 630 aa12.54□□□□□ -0.4
ZHX3-218ENST00000560364 YTHDC1Q96MU7 727 aaKnown RBP12.51□□□□□ -0.41
ZHX3-218ENST00000560364 RANGAP1P46060 587 aaPredicted RBP12.48□□□□□ -0.41
ZHX3-218ENST00000560364 LOC105371045A0A1W2PR82 267 aa12.48□□□□□ -0.41
ZHX3-218ENST00000560364 CHIC1Q5VXU3 224 aa12.48□□□□□ -0.41
ZHX3-218ENST00000560364 MYO15BQ96JP2 1530 aa12.47□□□□□ -0.41
ZHX3-218ENST00000560364 UBTFP17480 764 aaKnown RBP12.33□□□□□ -0.44
ZHX3-218ENST00000560364 DIEXFQ68CQ4 756 aaKnown RBP12.33□□□□□ -0.44
ZHX3-218ENST00000560364 PRKCSHP14314 528 aaPredicted RBP12.32□□□□□ -0.44
ZHX3-218ENST00000560364 SLC24A1O60721 1099 aa12.31□□□□□ -0.44
ZHX3-218ENST00000560364 ATP1B4Q9UN42 357 aaPredicted RBP12.27□□□□□ -0.45
ZHX3-218ENST00000560364 CCER1Q8TC90 406 aaPredicted RBP12.27□□□□□ -0.45
ZHX3-218ENST00000560364 ABCC9O60706 1549 aa12.26□□□□□ -0.45
ZHX3-218ENST00000560364 DCAF1Q9Y4B6 1507 aa12.21□□□□□ -0.46
ZHX3-218ENST00000560364 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.2□□□□□ -0.46
ZHX3-218ENST00000560364 ANP32EQ9BTT0 268 aa12.2□□□□□ -0.46
ZHX3-218ENST00000560364 CSRNP3Q8WYN3 585 aa12.14□□□□□ -0.47
ZHX3-218ENST00000560364 PABPN1Q86U42 306 aaKnown RBP eCLIP12.13□□□□□ -0.47
ZHX3-218ENST00000560364 ERICH6Q7L0X2 663 aa12.1□□□□□ -0.47
ZHX3-218ENST00000560364 CCDC180Q9P1Z9 1646 aa12.07□□□□□ -0.48
ZHX3-218ENST00000560364 BCANQ96GW7 911 aa11.96□□□□□ -0.5
ZHX3-218ENST00000560364 MIER1Q8N108 512 aa11.92□□□□□ -0.5
ZHX3-218ENST00000560364 ITGAEP38570 1179 aa11.92□□□□□ -0.5
ZHX3-218ENST00000560364 TSHZ2Q9NRE2 1034 aa11.91□□□□□ -0.5
ZHX3-218ENST00000560364 ZNF316A6NFI3 1004 aaPredicted RBP11.89□□□□□ -0.51
ZHX3-218ENST00000560364 ZCCHC6Q5VYS8 1495 aaKnown RBP11.88□□□□□ -0.51
ZHX3-218ENST00000560364 HNRNPUL2Q1KMD3 747 aaKnown RBP11.87□□□□□ -0.51
ZHX3-218ENST00000560364 SUPT16HQ9Y5B9 1047 aaKnown RBP11.87□□□□□ -0.51
ZHX3-218ENST00000560364 ANO8Q9HCE9 1232 aaPredicted RBP11.79□□□□□ -0.52
ZHX3-218ENST00000560364 CCDC136Q96JN2 1154 aa11.72□□□□□ -0.53
ZHX3-218ENST00000560364 MYT1LQ9UL68 1186 aa11.71□□□□□ -0.54
ZHX3-218ENST00000560364 NEFLP07196 543 aa11.68□□□□□ -0.54
ZHX3-218ENST00000560364 SCRIBQ14160 1630 aa11.68□□□□□ -0.54
ZHX3-218ENST00000560364 FKBP8Q14318 412 aa11.67□□□□□ -0.54
ZHX3-218ENST00000560364 RBM19Q9Y4C8 960 aaKnown RBP11.66□□□□□ -0.54
ZHX3-218ENST00000560364 CLSPNQ9HAW4 1339 aa11.64□□□□□ -0.55
ZHX3-218ENST00000560364 POLR3GLQ9BT43 218 aa11.62□□□□□ -0.55
ZHX3-218ENST00000560364 RTN4Q9NQC3 1192 aaKnown RBP11.62□□□□□ -0.55
ZHX3-218ENST00000560364 DEKP35659 375 aaKnown RBP11.61□□□□□ -0.55
ZHX3-218ENST00000560364 FAM50AQ14320 339 aaKnown RBP11.61□□□□□ -0.55
ZHX3-218ENST00000560364 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.61□□□□□ -0.55
ZHX3-218ENST00000560364 SALL2Q9Y467 1007 aaPredicted RBP11.6□□□□□ -0.55
ZHX3-218ENST00000560364 FBLN2P98095 1184 aa11.59□□□□□ -0.55
ZHX3-218ENST00000560364 NBR1Q14596 966 aa11.59□□□□□ -0.55
ZHX3-218ENST00000560364 EIF5BO60841 1220 aaKnown RBP11.57□□□□□ -0.56
ZHX3-218ENST00000560364 CNGB1Q14028 1251 aaPredicted RBP11.57□□□□□ -0.56
ZHX3-218ENST00000560364 P3H3Q8IVL6 736 aa11.55□□□□□ -0.56
ZHX3-218ENST00000560364 ARID3CA6NKF2 412 aa11.5□□□□□ -0.57
ZHX3-218ENST00000560364 MSH5O43196 834 aa11.49□□□□□ -0.57
ZHX3-218ENST00000560364 TRIM52Q96A61 297 aa11.48□□□□□ -0.57
ZHX3-218ENST00000560364 RTL5Q5HYW3 569 aaPredicted RBP11.47□□□□□ -0.57
ZHX3-218ENST00000560364 CDK11AQ9UQ88 783 aaPredicted RBP11.46□□□□□ -0.58
ZHX3-218ENST00000560364 PLPPR3Q6T4P5 718 aa11.44□□□□□ -0.58
ZHX3-218ENST00000560364 IRX6P78412 446 aaPredicted RBP11.39□□□□□ -0.59
ZHX3-218ENST00000560364 KCNH8Q96L42 1107 aa11.38□□□□□ -0.59
ZHX3-218ENST00000560364 RSF1Q96T23 1441 aaPredicted RBP11.38□□□□□ -0.59
ZHX3-218ENST00000560364 IL27Q8NEV9 243 aa11.37□□□□□ -0.59
ZHX3-218ENST00000560364 ZNF326Q5BKZ1 582 aaKnown RBP11.36□□□□□ -0.59
ZHX3-218ENST00000560364 UBE2Q2Q8WVN8 375 aa11.35□□□□□ -0.59
ZHX3-218ENST00000560364 RB1CC1Q8TDY2 1594 aa11.35□□□□□ -0.59
ZHX3-218ENST00000560364 SLC4A1APQ9BWU0 796 aaKnown RBP11.35□□□□□ -0.59
ZHX3-218ENST00000560364 ZNF777Q9ULD5 760 aaPredicted RBP11.32□□□□□ -0.6
ZHX3-218ENST00000560364 ERICH6BQ5W0A0 696 aa11.31□□□□□ -0.6
ZHX3-218ENST00000560364 PKNOX2Q96KN3 472 aa11.28□□□□□ -0.6
ZHX3-218ENST00000560364 FANCIQ9NVI1 1328 aa11.27□□□□□ -0.6
ZHX3-218ENST00000560364 NACADO15069 1562 aa11.27□□□□□ -0.6
ZHX3-218ENST00000560364 NOP58Q9Y2X3 529 aaKnown RBP11.26□□□□□ -0.61
ZHX3-218ENST00000560364 DDX10Q13206 875 aaKnown RBP11.23□□□□□ -0.61
ZHX3-218ENST00000560364 CECR2Q9BXF3 1484 aa11.23□□□□□ -0.61
ZHX3-218ENST00000560364 TIMELESSQ9UNS1 1208 aa11.22□□□□□ -0.61
ZHX3-218ENST00000560364 ANP32AP39687 249 aaKnown RBP11.18□□□□□ -0.62
ZHX3-218ENST00000560364 ANP32CO43423 234 aa11.18□□□□□ -0.62
ZHX3-218ENST00000560364 PAK3O75914 559 aaPredicted RBP11.18□□□□□ -0.62
ZHX3-218ENST00000560364 ZBTB47Q9UFB7 747 aaPredicted RBP11.18□□□□□ -0.62
ZHX3-218ENST00000560364 BAZ1BQ9UIG0 1483 aaKnown RBP11.17□□□□□ -0.62
ZHX3-218ENST00000560364 PLEKHG5O94827 1062 aa11.17□□□□□ -0.62
ZHX3-218ENST00000560364 NPM2Q86SE8 214 aaKnown RBP11.17□□□□□ -0.62
ZHX3-218ENST00000560364 CHIC2Q9UKJ5 165 aa11.17□□□□□ -0.62
ZHX3-218ENST00000560364 CLIP1P30622 1438 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms