Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 LINC01529-204ENST00000636474 1715 ntBASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 FLJ38576-201ENST00000623820 2459 ntBASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC10.18□□□□□ -0.78
LINC01558Q9Y6Z2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 AC080080.1-201ENST00000625121 2420 ntBASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC01558Q9Y6Z2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms