Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC22.66■■□□□ 1.22
CTDP1Q9Y5B0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC22.66■■□□□ 1.22
CTDP1Q9Y5B0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC22.66■■□□□ 1.22
CTDP1Q9Y5B0 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CTDP1Q9Y5B0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CTDP1Q9Y5B0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CTDP1Q9Y5B0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CTDP1Q9Y5B0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CTDP1Q9Y5B0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC22.65■■□□□ 1.22
CTDP1Q9Y5B0 PPP1R14BP5-201ENST00000440334 435 ntBASIC22.65■■□□□ 1.22
CTDP1Q9Y5B0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC22.65■■□□□ 1.22
CTDP1Q9Y5B0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CTDP1Q9Y5B0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC22.65■■□□□ 1.22
CTDP1Q9Y5B0 AC010331.1-201ENST00000611423 582 ntBASIC22.65■■□□□ 1.22
CTDP1Q9Y5B0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CTDP1Q9Y5B0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
CTDP1Q9Y5B0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CTDP1Q9Y5B0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC22.65■■□□□ 1.22
CTDP1Q9Y5B0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.65■■□□□ 1.22
CTDP1Q9Y5B0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC22.65■■□□□ 1.22
CTDP1Q9Y5B0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CTDP1Q9Y5B0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CTDP1Q9Y5B0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC22.65■■□□□ 1.22
CTDP1Q9Y5B0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CTDP1Q9Y5B0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CTDP1Q9Y5B0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.64■■□□□ 1.22
CTDP1Q9Y5B0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CTDP1Q9Y5B0 LINC01568-207ENST00000641790 1380 ntBASIC22.64■■□□□ 1.22
CTDP1Q9Y5B0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
CTDP1Q9Y5B0 BX119927.1-201ENST00000636596 1552 ntBASIC22.64■■□□□ 1.22
CTDP1Q9Y5B0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CTDP1Q9Y5B0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
CTDP1Q9Y5B0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC22.64■■□□□ 1.21
CTDP1Q9Y5B0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CTDP1Q9Y5B0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CTDP1Q9Y5B0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC22.64■■□□□ 1.21
CTDP1Q9Y5B0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC22.64■■□□□ 1.21
CTDP1Q9Y5B0 AC026271.3-201ENST00000571884 352 ntBASIC22.64■■□□□ 1.21
CTDP1Q9Y5B0 AC005363.2-201ENST00000618631 242 ntBASIC22.64■■□□□ 1.21
CTDP1Q9Y5B0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CTDP1Q9Y5B0 KRT8P9-201ENST00000558927 1449 ntBASIC22.64■■□□□ 1.21
CTDP1Q9Y5B0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
CTDP1Q9Y5B0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.63■■□□□ 1.21
CTDP1Q9Y5B0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC22.63■■□□□ 1.21
CTDP1Q9Y5B0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CTDP1Q9Y5B0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC22.63■■□□□ 1.21
CTDP1Q9Y5B0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CTDP1Q9Y5B0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.63■■□□□ 1.21
CTDP1Q9Y5B0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CTDP1Q9Y5B0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC22.63■■□□□ 1.21
CTDP1Q9Y5B0 FITM1-202ENST00000559294 800 ntBASIC22.63■■□□□ 1.21
CTDP1Q9Y5B0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CTDP1Q9Y5B0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC22.63■■□□□ 1.21
CTDP1Q9Y5B0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CTDP1Q9Y5B0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CTDP1Q9Y5B0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.63■■□□□ 1.21
CTDP1Q9Y5B0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CTDP1Q9Y5B0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CTDP1Q9Y5B0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CTDP1Q9Y5B0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CTDP1Q9Y5B0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CTDP1Q9Y5B0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CTDP1Q9Y5B0 AC007375.3-201ENST00000600936 2314 ntBASIC22.63■■□□□ 1.21
CTDP1Q9Y5B0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
CTDP1Q9Y5B0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CTDP1Q9Y5B0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CTDP1Q9Y5B0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CTDP1Q9Y5B0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CTDP1Q9Y5B0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CTDP1Q9Y5B0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC22.62■■□□□ 1.21
CTDP1Q9Y5B0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC22.62■■□□□ 1.21
CTDP1Q9Y5B0 AC145285.6-201ENST00000604632 637 ntBASIC22.62■■□□□ 1.21
CTDP1Q9Y5B0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.62■■□□□ 1.21
CTDP1Q9Y5B0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CTDP1Q9Y5B0 AC020907.5-201ENST00000624372 1936 ntBASIC22.62■■□□□ 1.21
CTDP1Q9Y5B0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CTDP1Q9Y5B0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CTDP1Q9Y5B0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CTDP1Q9Y5B0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CTDP1Q9Y5B0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CTDP1Q9Y5B0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
CTDP1Q9Y5B0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CTDP1Q9Y5B0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.61■■□□□ 1.21
CTDP1Q9Y5B0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC22.61■■□□□ 1.21
CTDP1Q9Y5B0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CTDP1Q9Y5B0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CTDP1Q9Y5B0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CTDP1Q9Y5B0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC22.61■■□□□ 1.21
CTDP1Q9Y5B0 RCN1P1-201ENST00000400413 996 ntBASIC22.61■■□□□ 1.21
CTDP1Q9Y5B0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22.61■■□□□ 1.21
CTDP1Q9Y5B0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC22.61■■□□□ 1.21
CTDP1Q9Y5B0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC22.61■■□□□ 1.21
CTDP1Q9Y5B0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC22.61■■□□□ 1.21
CTDP1Q9Y5B0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC22.61■■□□□ 1.21
CTDP1Q9Y5B0 TK2-213ENST00000563369 882 ntTSL 5 BASIC22.61■■□□□ 1.21
CTDP1Q9Y5B0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC22.61■■□□□ 1.21
CTDP1Q9Y5B0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC22.61■■□□□ 1.21
CTDP1Q9Y5B0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC22.61■■□□□ 1.21
CTDP1Q9Y5B0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC22.61■■□□□ 1.21
CTDP1Q9Y5B0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms