Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
R3HCC1Q9Y3T6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC22.31■■□□□ 1.16
R3HCC1Q9Y3T6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
R3HCC1Q9Y3T6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
R3HCC1Q9Y3T6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
R3HCC1Q9Y3T6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
R3HCC1Q9Y3T6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.31■■□□□ 1.16
R3HCC1Q9Y3T6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 CYP2T1P-201ENST00000432607 1285 ntBASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
R3HCC1Q9Y3T6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
R3HCC1Q9Y3T6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
R3HCC1Q9Y3T6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
R3HCC1Q9Y3T6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
R3HCC1Q9Y3T6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
R3HCC1Q9Y3T6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
R3HCC1Q9Y3T6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.29■■□□□ 1.16
R3HCC1Q9Y3T6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
R3HCC1Q9Y3T6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
R3HCC1Q9Y3T6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.29■■□□□ 1.16
R3HCC1Q9Y3T6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.29■■□□□ 1.16
R3HCC1Q9Y3T6 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.29■■□□□ 1.16
R3HCC1Q9Y3T6 OR10C1-204ENST00000622521 1039 ntBASIC22.29■■□□□ 1.16
R3HCC1Q9Y3T6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC22.29■■□□□ 1.16
R3HCC1Q9Y3T6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
R3HCC1Q9Y3T6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
R3HCC1Q9Y3T6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
R3HCC1Q9Y3T6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
R3HCC1Q9Y3T6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC22.29■■□□□ 1.16
R3HCC1Q9Y3T6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
R3HCC1Q9Y3T6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
R3HCC1Q9Y3T6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
R3HCC1Q9Y3T6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.29■■□□□ 1.16
R3HCC1Q9Y3T6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
R3HCC1Q9Y3T6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
R3HCC1Q9Y3T6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
R3HCC1Q9Y3T6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
R3HCC1Q9Y3T6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
R3HCC1Q9Y3T6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.28■■□□□ 1.16
R3HCC1Q9Y3T6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC22.28■■□□□ 1.16
R3HCC1Q9Y3T6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
R3HCC1Q9Y3T6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.28■■□□□ 1.16
R3HCC1Q9Y3T6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
R3HCC1Q9Y3T6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
R3HCC1Q9Y3T6 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.28■■□□□ 1.16
R3HCC1Q9Y3T6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
R3HCC1Q9Y3T6 AF201337.1-201ENST00000520239 748 ntBASIC22.28■■□□□ 1.16
R3HCC1Q9Y3T6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.28■■□□□ 1.16
R3HCC1Q9Y3T6 AL121832.2-201ENST00000610979 668 ntBASIC22.28■■□□□ 1.16
R3HCC1Q9Y3T6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.28■■□□□ 1.16
R3HCC1Q9Y3T6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.28■■□□□ 1.16
R3HCC1Q9Y3T6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
R3HCC1Q9Y3T6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
R3HCC1Q9Y3T6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
R3HCC1Q9Y3T6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC22.28■■□□□ 1.16
R3HCC1Q9Y3T6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
R3HCC1Q9Y3T6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
R3HCC1Q9Y3T6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
R3HCC1Q9Y3T6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
R3HCC1Q9Y3T6 AC020916.1-201ENST00000587762 1774 ntBASIC22.27■■□□□ 1.16
R3HCC1Q9Y3T6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
R3HCC1Q9Y3T6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
R3HCC1Q9Y3T6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
R3HCC1Q9Y3T6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC22.27■■□□□ 1.16
R3HCC1Q9Y3T6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC22.27■■□□□ 1.16
R3HCC1Q9Y3T6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
R3HCC1Q9Y3T6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
R3HCC1Q9Y3T6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
R3HCC1Q9Y3T6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
R3HCC1Q9Y3T6 GPX1P1-201ENST00000388829 606 ntBASIC22.27■■□□□ 1.16
R3HCC1Q9Y3T6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.27■■□□□ 1.16
R3HCC1Q9Y3T6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.27■■□□□ 1.16
R3HCC1Q9Y3T6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
R3HCC1Q9Y3T6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC22.27■■□□□ 1.16
R3HCC1Q9Y3T6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms