Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.28■■□□□ 1
CALCOCO1Q9P1Z2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.28■■□□□ 1
CALCOCO1Q9P1Z2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
CALCOCO1Q9P1Z2 CYP2T3P-201ENST00000601990 817 ntBASIC21.28■■□□□ 1
CALCOCO1Q9P1Z2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CALCOCO1Q9P1Z2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CALCOCO1Q9P1Z2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.28■■□□□ 1
CALCOCO1Q9P1Z2 AC112907.3-201ENST00000577781 2400 ntBASIC21.28■■□□□ 1
CALCOCO1Q9P1Z2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CALCOCO1Q9P1Z2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.28■■□□□ 1
CALCOCO1Q9P1Z2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CALCOCO1Q9P1Z2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.28■■□□□ 1
CALCOCO1Q9P1Z2 AC087633.2-202ENST00000565166 1439 ntBASIC21.28■■□□□ 1
CALCOCO1Q9P1Z2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CALCOCO1Q9P1Z2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC21.28■■□□□ 1
CALCOCO1Q9P1Z2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
CALCOCO1Q9P1Z2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21.28■■□□□ 1
CALCOCO1Q9P1Z2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.28■■□□□ 1
CALCOCO1Q9P1Z2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.28■■□□□ 1
CALCOCO1Q9P1Z2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CALCOCO1Q9P1Z2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CALCOCO1Q9P1Z2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CALCOCO1Q9P1Z2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CALCOCO1Q9P1Z2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CALCOCO1Q9P1Z2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.27■■□□□ 1
CALCOCO1Q9P1Z2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.27■■□□□ 1
CALCOCO1Q9P1Z2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.27■■□□□ 1
CALCOCO1Q9P1Z2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CALCOCO1Q9P1Z2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.27■■□□□ 1
CALCOCO1Q9P1Z2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CALCOCO1Q9P1Z2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.27■■□□□ 1
CALCOCO1Q9P1Z2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CALCOCO1Q9P1Z2 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CALCOCO1Q9P1Z2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CALCOCO1Q9P1Z2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CALCOCO1Q9P1Z2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CALCOCO1Q9P1Z2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 MCRIP2P1-201ENST00000394346 511 ntBASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 POU5F1P3-201ENST00000428824 1078 ntBASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 AC092118.2-201ENST00000613495 667 ntBASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CALCOCO1Q9P1Z2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CALCOCO1Q9P1Z2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CALCOCO1Q9P1Z2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CALCOCO1Q9P1Z2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CALCOCO1Q9P1Z2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CALCOCO1Q9P1Z2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CALCOCO1Q9P1Z2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.25■□□□□ 0.99
CALCOCO1Q9P1Z2 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CALCOCO1Q9P1Z2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CALCOCO1Q9P1Z2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CALCOCO1Q9P1Z2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CALCOCO1Q9P1Z2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
CALCOCO1Q9P1Z2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.25■□□□□ 0.99
CALCOCO1Q9P1Z2 KRT8P36-201ENST00000489121 1440 ntBASIC21.25■□□□□ 0.99
CALCOCO1Q9P1Z2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.25■□□□□ 0.99
CALCOCO1Q9P1Z2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.25■□□□□ 0.99
CALCOCO1Q9P1Z2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CALCOCO1Q9P1Z2 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.25■□□□□ 0.99
CALCOCO1Q9P1Z2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.25■□□□□ 0.99
CALCOCO1Q9P1Z2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.25■□□□□ 0.99
CALCOCO1Q9P1Z2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CALCOCO1Q9P1Z2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CALCOCO1Q9P1Z2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CALCOCO1Q9P1Z2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CALCOCO1Q9P1Z2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CALCOCO1Q9P1Z2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.24■□□□□ 0.99
CALCOCO1Q9P1Z2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CALCOCO1Q9P1Z2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CALCOCO1Q9P1Z2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CALCOCO1Q9P1Z2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CALCOCO1Q9P1Z2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
CALCOCO1Q9P1Z2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CALCOCO1Q9P1Z2 BX276092.2-201ENST00000417668 665 ntBASIC21.24■□□□□ 0.99
CALCOCO1Q9P1Z2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CALCOCO1Q9P1Z2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.24■□□□□ 0.99
CALCOCO1Q9P1Z2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms