Protein–RNA interactions for Protein: Q9NWB1

RBFOX1, RNA binding protein fox-1 homolog 1, humanhuman

Known RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1Q9NWB1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.25■□□□□ 0.35
RBFOX1Q9NWB1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RBFOX1Q9NWB1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.25■□□□□ 0.35
RBFOX1Q9NWB1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RBFOX1Q9NWB1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RBFOX1Q9NWB1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RBFOX1Q9NWB1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
RBFOX1Q9NWB1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.25■□□□□ 0.35
RBFOX1Q9NWB1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RBFOX1Q9NWB1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.25■□□□□ 0.35
RBFOX1Q9NWB1 CDV3P1-201ENST00000471403 739 ntBASIC17.25■□□□□ 0.35
RBFOX1Q9NWB1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RBFOX1Q9NWB1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.25■□□□□ 0.35
RBFOX1Q9NWB1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
RBFOX1Q9NWB1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.25■□□□□ 0.35
RBFOX1Q9NWB1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RBFOX1Q9NWB1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.25■□□□□ 0.35
RBFOX1Q9NWB1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RBFOX1Q9NWB1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.25■□□□□ 0.35
RBFOX1Q9NWB1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RBFOX1Q9NWB1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RBFOX1Q9NWB1 CROCCP3-202ENST00000420820 1947 ntBASIC17.25■□□□□ 0.35
RBFOX1Q9NWB1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.25■□□□□ 0.35
RBFOX1Q9NWB1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RBFOX1Q9NWB1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RBFOX1Q9NWB1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 KRT18P5-201ENST00000436075 1291 ntBASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 AC137761.2-201ENST00000561729 223 ntBASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 AC145350.3-201ENST00000569033 163 ntBASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 AC010536.3-201ENST00000620306 533 ntBASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RBFOX1Q9NWB1 AC009113.1-201ENST00000570267 2443 ntBASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 AC104581.1-202ENST00000635932 2618 ntBASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 TERF1P5-201ENST00000477545 1207 ntBASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RBFOX1Q9NWB1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.22■□□□□ 0.35
RBFOX1Q9NWB1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.22■□□□□ 0.35
RBFOX1Q9NWB1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.22■□□□□ 0.35
RBFOX1Q9NWB1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms