Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 AC104771.1-201ENST00000603335 964 ntBASIC17.68■□□□□ 0.42
HINT3Q9NQE9 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 CYP2T3P-201ENST00000601990 817 ntBASIC17.67■□□□□ 0.42
HINT3Q9NQE9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.67■□□□□ 0.42
HINT3Q9NQE9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 SLC29A4P1-201ENST00000398760 971 ntBASIC17.66■□□□□ 0.42
HINT3Q9NQE9 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HINT3Q9NQE9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HINT3Q9NQE9 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.65■□□□□ 0.42
HINT3Q9NQE9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
HINT3Q9NQE9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.65■□□□□ 0.42
HINT3Q9NQE9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HINT3Q9NQE9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HINT3Q9NQE9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HINT3Q9NQE9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HINT3Q9NQE9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HINT3Q9NQE9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HINT3Q9NQE9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
HINT3Q9NQE9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HINT3Q9NQE9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HINT3Q9NQE9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HINT3Q9NQE9 AL355472.2-201ENST00000422958 438 ntBASIC17.65■□□□□ 0.42
HINT3Q9NQE9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HINT3Q9NQE9 TSPY6P-201ENST00000448518 926 ntBASIC17.65■□□□□ 0.42
HINT3Q9NQE9 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.65■□□□□ 0.42
HINT3Q9NQE9 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HINT3Q9NQE9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HINT3Q9NQE9 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HINT3Q9NQE9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HINT3Q9NQE9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HINT3Q9NQE9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HINT3Q9NQE9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HINT3Q9NQE9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HINT3Q9NQE9 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms