Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 AP001271.2-201ENST00000624018 1556 ntBASIC18.56■□□□□ 0.56
MKKSQ9NPJ1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.56■□□□□ 0.56
MKKSQ9NPJ1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MKKSQ9NPJ1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
MKKSQ9NPJ1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MKKSQ9NPJ1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MKKSQ9NPJ1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MKKSQ9NPJ1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
MKKSQ9NPJ1 AL596275.1-201ENST00000423464 877 ntBASIC18.56■□□□□ 0.56
MKKSQ9NPJ1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MKKSQ9NPJ1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.56■□□□□ 0.56
MKKSQ9NPJ1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
MKKSQ9NPJ1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
MKKSQ9NPJ1 AL049637.2-201ENST00000641778 930 ntBASIC18.56■□□□□ 0.56
MKKSQ9NPJ1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MKKSQ9NPJ1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.56■□□□□ 0.56
MKKSQ9NPJ1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MKKSQ9NPJ1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
MKKSQ9NPJ1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.56■□□□□ 0.56
MKKSQ9NPJ1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.56■□□□□ 0.56
MKKSQ9NPJ1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MKKSQ9NPJ1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.56■□□□□ 0.56
MKKSQ9NPJ1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 MIR4497-201ENST00000583208 89 ntBASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
MKKSQ9NPJ1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.54■□□□□ 0.56
MKKSQ9NPJ1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
MKKSQ9NPJ1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.54■□□□□ 0.56
MKKSQ9NPJ1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
MKKSQ9NPJ1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MKKSQ9NPJ1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MKKSQ9NPJ1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MKKSQ9NPJ1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MKKSQ9NPJ1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
MKKSQ9NPJ1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.54■□□□□ 0.56
MKKSQ9NPJ1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MKKSQ9NPJ1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.54■□□□□ 0.56
MKKSQ9NPJ1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MKKSQ9NPJ1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.54■□□□□ 0.56
MKKSQ9NPJ1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.54■□□□□ 0.56
MKKSQ9NPJ1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
MKKSQ9NPJ1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MKKSQ9NPJ1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MKKSQ9NPJ1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
MKKSQ9NPJ1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MKKSQ9NPJ1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.53■□□□□ 0.56
MKKSQ9NPJ1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MKKSQ9NPJ1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MKKSQ9NPJ1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
MKKSQ9NPJ1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.53■□□□□ 0.56
MKKSQ9NPJ1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MKKSQ9NPJ1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MKKSQ9NPJ1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
MKKSQ9NPJ1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.53■□□□□ 0.56
MKKSQ9NPJ1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MKKSQ9NPJ1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MKKSQ9NPJ1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.53■□□□□ 0.56
MKKSQ9NPJ1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MKKSQ9NPJ1 AF186192.3-201ENST00000583427 947 ntBASIC18.53■□□□□ 0.56
MKKSQ9NPJ1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.53■□□□□ 0.56
MKKSQ9NPJ1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.53■□□□□ 0.56
MKKSQ9NPJ1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.53■□□□□ 0.56
MKKSQ9NPJ1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MKKSQ9NPJ1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
MKKSQ9NPJ1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
MKKSQ9NPJ1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.53■□□□□ 0.56
MKKSQ9NPJ1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MKKSQ9NPJ1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.52■□□□□ 0.56
MKKSQ9NPJ1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MKKSQ9NPJ1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.52■□□□□ 0.56
MKKSQ9NPJ1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.52■□□□□ 0.56
MKKSQ9NPJ1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.52■□□□□ 0.56
MKKSQ9NPJ1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms