Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRTM1Q9HBL6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRTM1Q9HBL6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 CROCCP5-201ENST00000436658 830 ntBASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LRTM1Q9HBL6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRTM1Q9HBL6 AL020996.1-203ENST00000536896 2307 ntBASIC18.8■□□□□ 0.6
LRTM1Q9HBL6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRTM1Q9HBL6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRTM1Q9HBL6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRTM1Q9HBL6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRTM1Q9HBL6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRTM1Q9HBL6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRTM1Q9HBL6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.8■□□□□ 0.6
LRTM1Q9HBL6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LRTM1Q9HBL6 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.8■□□□□ 0.6
LRTM1Q9HBL6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.8■□□□□ 0.6
LRTM1Q9HBL6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.8■□□□□ 0.6
LRTM1Q9HBL6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRTM1Q9HBL6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.8■□□□□ 0.6
LRTM1Q9HBL6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LRTM1Q9HBL6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.8■□□□□ 0.6
LRTM1Q9HBL6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LRTM1Q9HBL6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRTM1Q9HBL6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.8■□□□□ 0.6
LRTM1Q9HBL6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.8■□□□□ 0.6
LRTM1Q9HBL6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.8■□□□□ 0.6
LRTM1Q9HBL6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.8■□□□□ 0.6
LRTM1Q9HBL6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRTM1Q9HBL6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LRTM1Q9HBL6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 MIPEPP3-201ENST00000412105 444 ntBASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 AC073210.2-201ENST00000430369 194 ntBASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 AC005829.2-201ENST00000571422 1056 ntBASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 TFP1-202ENST00000475455 1573 ntBASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRTM1Q9HBL6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
LRTM1Q9HBL6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms