Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDH23Q9H251 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CDH23Q9H251 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH23Q9H251 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDH23Q9H251 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH23Q9H251 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH23Q9H251 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.9■□□□□ 0.94
CDH23Q9H251 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.9■□□□□ 0.94
CDH23Q9H251 AC112907.2-201ENST00000448639 330 ntBASIC20.9■□□□□ 0.94
CDH23Q9H251 TSPY17P-201ENST00000450329 467 ntBASIC20.9■□□□□ 0.94
CDH23Q9H251 AC092183.1-201ENST00000469884 875 ntBASIC20.9■□□□□ 0.94
CDH23Q9H251 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.9■□□□□ 0.94
CDH23Q9H251 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH23Q9H251 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH23Q9H251 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.9■□□□□ 0.94
CDH23Q9H251 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH23Q9H251 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH23Q9H251 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH23Q9H251 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH23Q9H251 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH23Q9H251 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH23Q9H251 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.9■□□□□ 0.94
CDH23Q9H251 AP000523.1-201ENST00000398242 1049 ntBASIC20.89■□□□□ 0.94
CDH23Q9H251 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
CDH23Q9H251 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CDH23Q9H251 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CDH23Q9H251 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.89■□□□□ 0.94
CDH23Q9H251 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.89■□□□□ 0.94
CDH23Q9H251 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.94
CDH23Q9H251 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.89■□□□□ 0.93
CDH23Q9H251 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH23Q9H251 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.89■□□□□ 0.93
CDH23Q9H251 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.89■□□□□ 0.93
CDH23Q9H251 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH23Q9H251 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH23Q9H251 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH23Q9H251 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDH23Q9H251 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH23Q9H251 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH23Q9H251 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDH23Q9H251 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDH23Q9H251 GCSHP2-201ENST00000560971 527 ntBASIC20.89■□□□□ 0.93
CDH23Q9H251 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.89■□□□□ 0.93
CDH23Q9H251 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH23Q9H251 AL645929.1-201ENST00000420084 975 ntBASIC20.88■□□□□ 0.93
CDH23Q9H251 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.88■□□□□ 0.93
CDH23Q9H251 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.88■□□□□ 0.93
CDH23Q9H251 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CDH23Q9H251 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.88■□□□□ 0.93
CDH23Q9H251 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDH23Q9H251 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH23Q9H251 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDH23Q9H251 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.88■□□□□ 0.93
CDH23Q9H251 TSPY12P-201ENST00000421279 868 ntBASIC20.88■□□□□ 0.93
CDH23Q9H251 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CDH23Q9H251 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH23Q9H251 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH23Q9H251 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH23Q9H251 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH23Q9H251 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH23Q9H251 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH23Q9H251 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH23Q9H251 ZNF444P1-201ENST00000559497 298 ntBASIC20.87■□□□□ 0.93
CDH23Q9H251 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CDH23Q9H251 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.87■□□□□ 0.93
CDH23Q9H251 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.87■□□□□ 0.93
CDH23Q9H251 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH23Q9H251 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH23Q9H251 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CDH23Q9H251 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH23Q9H251 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDH23Q9H251 AL353719.1-201ENST00000566847 864 ntBASIC20.87■□□□□ 0.93
CDH23Q9H251 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.87■□□□□ 0.93
CDH23Q9H251 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH23Q9H251 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDH23Q9H251 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH23Q9H251 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH23Q9H251 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDH23Q9H251 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.86■□□□□ 0.93
CDH23Q9H251 AC011298.2-201ENST00000617989 482 ntBASIC20.86■□□□□ 0.93
CDH23Q9H251 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.86■□□□□ 0.93
CDH23Q9H251 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH23Q9H251 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.86■□□□□ 0.93
CDH23Q9H251 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH23Q9H251 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH23Q9H251 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH23Q9H251 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.86■□□□□ 0.93
CDH23Q9H251 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.86■□□□□ 0.93
CDH23Q9H251 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDH23Q9H251 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.86■□□□□ 0.93
CDH23Q9H251 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.86■□□□□ 0.93
CDH23Q9H251 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH23Q9H251 EP400NL-214ENST00000641289 2402 ntBASIC20.86■□□□□ 0.93
CDH23Q9H251 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH23Q9H251 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH23Q9H251 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.86■□□□□ 0.93
CDH23Q9H251 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH23Q9H251 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
CDH23Q9H251 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDH23Q9H251 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms