Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 OR6D1P-202ENST00000641007 5290 ntBASIC15.84■□□□□ 0.13
NKX6-2Q9C056 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 AL033527.3-201ENST00000566366 1196 ntBASIC15.84■□□□□ 0.13
NKX6-2Q9C056 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 AC011484.1-201ENST00000377652 1995 ntBASIC15.84■□□□□ 0.13
NKX6-2Q9C056 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 PCDHA12-202ENST00000613593 2588 ntBASIC15.83■□□□□ 0.13
NKX6-2Q9C056 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NKX6-2Q9C056 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
NKX6-2Q9C056 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NKX6-2Q9C056 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.83■□□□□ 0.13
NKX6-2Q9C056 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NKX6-2Q9C056 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX6-2Q9C056 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.83■□□□□ 0.12
NKX6-2Q9C056 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NKX6-2Q9C056 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NKX6-2Q9C056 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX6-2Q9C056 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX6-2Q9C056 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NKX6-2Q9C056 AC008894.3-201ENST00000624324 3103 ntBASIC15.83■□□□□ 0.12
NKX6-2Q9C056 TSPY9P-201ENST00000440215 945 ntBASIC15.83■□□□□ 0.12
NKX6-2Q9C056 TSPY11P-201ENST00000442607 1045 ntBASIC15.83■□□□□ 0.12
NKX6-2Q9C056 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC15.83■□□□□ 0.12
NKX6-2Q9C056 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX6-2Q9C056 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.83■□□□□ 0.12
NKX6-2Q9C056 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NKX6-2Q9C056 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX6-2Q9C056 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX6-2Q9C056 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NKX6-2Q9C056 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
NKX6-2Q9C056 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX6-2Q9C056 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX6-2Q9C056 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX6-2Q9C056 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX6-2Q9C056 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NKX6-2Q9C056 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.83■□□□□ 0.12
NKX6-2Q9C056 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
NKX6-2Q9C056 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
NKX6-2Q9C056 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
NKX6-2Q9C056 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.82■□□□□ 0.12
NKX6-2Q9C056 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms