Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.79■□□□□ 0.44
SNX18Q96RF0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SNX18Q96RF0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.79■□□□□ 0.44
SNX18Q96RF0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SNX18Q96RF0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX18Q96RF0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SNX18Q96RF0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.79■□□□□ 0.44
SNX18Q96RF0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SNX18Q96RF0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.79■□□□□ 0.44
SNX18Q96RF0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX18Q96RF0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX18Q96RF0 AC007613.1-201ENST00000572811 2597 ntBASIC17.79■□□□□ 0.44
SNX18Q96RF0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX18Q96RF0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.79■□□□□ 0.44
SNX18Q96RF0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.79■□□□□ 0.44
SNX18Q96RF0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNX18Q96RF0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX18Q96RF0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNX18Q96RF0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX18Q96RF0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNX18Q96RF0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX18Q96RF0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SNX18Q96RF0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNX18Q96RF0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SNX18Q96RF0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.78■□□□□ 0.44
SNX18Q96RF0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNX18Q96RF0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SNX18Q96RF0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX18Q96RF0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SNX18Q96RF0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
SNX18Q96RF0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX18Q96RF0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.78■□□□□ 0.44
SNX18Q96RF0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX18Q96RF0 AL121832.2-201ENST00000610979 668 ntBASIC17.78■□□□□ 0.44
SNX18Q96RF0 AL589743.5-201ENST00000616611 1050 ntBASIC17.78■□□□□ 0.44
SNX18Q96RF0 AL050303.2-201ENST00000619798 666 ntBASIC17.78■□□□□ 0.44
SNX18Q96RF0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNX18Q96RF0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX18Q96RF0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.78■□□□□ 0.44
SNX18Q96RF0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX18Q96RF0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.78■□□□□ 0.44
SNX18Q96RF0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.78■□□□□ 0.44
SNX18Q96RF0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX18Q96RF0 AL049812.1-201ENST00000432563 2267 ntBASIC17.78■□□□□ 0.44
SNX18Q96RF0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX18Q96RF0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
SNX18Q96RF0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SNX18Q96RF0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNX18Q96RF0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.78■□□□□ 0.44
SNX18Q96RF0 AC093503.3-201ENST00000624917 2352 ntBASIC17.77■□□□□ 0.44
SNX18Q96RF0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX18Q96RF0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.77■□□□□ 0.44
SNX18Q96RF0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SNX18Q96RF0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
SNX18Q96RF0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX18Q96RF0 HLA-G-202ENST00000376815 851 ntBASIC17.77■□□□□ 0.44
SNX18Q96RF0 HLA-G-203ENST00000376818 1127 ntBASIC17.77■□□□□ 0.44
SNX18Q96RF0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.77■□□□□ 0.44
SNX18Q96RF0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.77■□□□□ 0.44
SNX18Q96RF0 AC023632.3-201ENST00000521633 145 ntBASIC17.77■□□□□ 0.44
SNX18Q96RF0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX18Q96RF0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.77■□□□□ 0.44
SNX18Q96RF0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.77■□□□□ 0.44
SNX18Q96RF0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNX18Q96RF0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SNX18Q96RF0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
SNX18Q96RF0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
SNX18Q96RF0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SNX18Q96RF0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.77■□□□□ 0.43
SNX18Q96RF0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SNX18Q96RF0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
SNX18Q96RF0 AC120498.9-201ENST00000339021 3867 ntBASIC17.76■□□□□ 0.43
SNX18Q96RF0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX18Q96RF0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNX18Q96RF0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNX18Q96RF0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.76■□□□□ 0.43
SNX18Q96RF0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SNX18Q96RF0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNX18Q96RF0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX18Q96RF0 AP001271.2-201ENST00000624018 1556 ntBASIC17.76■□□□□ 0.43
SNX18Q96RF0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX18Q96RF0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX18Q96RF0 AC010980.2-201ENST00000587099 1412 ntBASIC17.76■□□□□ 0.43
SNX18Q96RF0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
SNX18Q96RF0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX18Q96RF0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.76■□□□□ 0.43
SNX18Q96RF0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.76■□□□□ 0.43
SNX18Q96RF0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX18Q96RF0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.76■□□□□ 0.43
SNX18Q96RF0 AC083906.2-201ENST00000511578 360 ntBASIC17.76■□□□□ 0.43
SNX18Q96RF0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNX18Q96RF0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.76■□□□□ 0.43
SNX18Q96RF0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.76■□□□□ 0.43
SNX18Q96RF0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.76■□□□□ 0.43
SNX18Q96RF0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
SNX18Q96RF0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNX18Q96RF0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SNX18Q96RF0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.76■□□□□ 0.43
SNX18Q96RF0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.76■□□□□ 0.43
SNX18Q96RF0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms