Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC23.2■■□□□ 1.3
NEK1Q96PY6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NEK1Q96PY6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.19■■□□□ 1.3
NEK1Q96PY6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NEK1Q96PY6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NEK1Q96PY6 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NEK1Q96PY6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC23.19■■□□□ 1.3
NEK1Q96PY6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NEK1Q96PY6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NEK1Q96PY6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
NEK1Q96PY6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC23.19■■□□□ 1.3
NEK1Q96PY6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC23.19■■□□□ 1.3
NEK1Q96PY6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC23.19■■□□□ 1.3
NEK1Q96PY6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC23.19■■□□□ 1.3
NEK1Q96PY6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NEK1Q96PY6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
NEK1Q96PY6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC23.19■■□□□ 1.3
NEK1Q96PY6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NEK1Q96PY6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC23.19■■□□□ 1.3
NEK1Q96PY6 AC026366.1-201ENST00000488803 879 ntBASIC23.19■■□□□ 1.3
NEK1Q96PY6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.19■■□□□ 1.3
NEK1Q96PY6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NEK1Q96PY6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NEK1Q96PY6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC23.18■■□□□ 1.3
NEK1Q96PY6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
NEK1Q96PY6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.18■■□□□ 1.3
NEK1Q96PY6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
NEK1Q96PY6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.18■■□□□ 1.3
NEK1Q96PY6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NEK1Q96PY6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NEK1Q96PY6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NEK1Q96PY6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NEK1Q96PY6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NEK1Q96PY6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NEK1Q96PY6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.18■■□□□ 1.3
NEK1Q96PY6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
NEK1Q96PY6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
NEK1Q96PY6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
NEK1Q96PY6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC23.18■■□□□ 1.3
NEK1Q96PY6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC23.18■■□□□ 1.3
NEK1Q96PY6 CD99P1-205ENST00000527459 561 ntBASIC23.18■■□□□ 1.3
NEK1Q96PY6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.18■■□□□ 1.3
NEK1Q96PY6 AC005332.7-201ENST00000614046 2005 ntBASIC23.18■■□□□ 1.3
NEK1Q96PY6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
NEK1Q96PY6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NEK1Q96PY6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.17■■□□□ 1.3
NEK1Q96PY6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NEK1Q96PY6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC23.17■■□□□ 1.3
NEK1Q96PY6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NEK1Q96PY6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NEK1Q96PY6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NEK1Q96PY6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NEK1Q96PY6 YBX1P10-201ENST00000444752 975 ntBASIC23.17■■□□□ 1.3
NEK1Q96PY6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
NEK1Q96PY6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
NEK1Q96PY6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NEK1Q96PY6 Z82202.1-201ENST00000623446 1880 ntBASIC23.17■■□□□ 1.3
NEK1Q96PY6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NEK1Q96PY6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NEK1Q96PY6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NEK1Q96PY6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NEK1Q96PY6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NEK1Q96PY6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NEK1Q96PY6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NEK1Q96PY6 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NEK1Q96PY6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
NEK1Q96PY6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NEK1Q96PY6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NEK1Q96PY6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC23.16■■□□□ 1.3
NEK1Q96PY6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC23.16■■□□□ 1.3
NEK1Q96PY6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NEK1Q96PY6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC23.16■■□□□ 1.3
NEK1Q96PY6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
NEK1Q96PY6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
NEK1Q96PY6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NEK1Q96PY6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NEK1Q96PY6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC23.16■■□□□ 1.3
NEK1Q96PY6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NEK1Q96PY6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.16■■□□□ 1.3
NEK1Q96PY6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC23.16■■□□□ 1.3
NEK1Q96PY6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.16■■□□□ 1.3
NEK1Q96PY6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.16■■□□□ 1.3
NEK1Q96PY6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC23.16■■□□□ 1.3
NEK1Q96PY6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC23.16■■□□□ 1.3
NEK1Q96PY6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
NEK1Q96PY6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
NEK1Q96PY6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NEK1Q96PY6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC23.16■■□□□ 1.3
NEK1Q96PY6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NEK1Q96PY6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC23.16■■□□□ 1.3
NEK1Q96PY6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NEK1Q96PY6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NEK1Q96PY6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC23.15■■□□□ 1.3
NEK1Q96PY6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC23.15■■□□□ 1.3
NEK1Q96PY6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
NEK1Q96PY6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NEK1Q96PY6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
NEK1Q96PY6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NEK1Q96PY6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.15■■□□□ 1.3
NEK1Q96PY6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms