Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 AL133373.2-201ENST00000623187 2828 ntBASIC14.95□□□□□ -0.02
LINC00479Q96M42 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
LINC00479Q96M42 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14.95□□□□□ -0.02
LINC00479Q96M42 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00479Q96M42 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00479Q96M42 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00479Q96M42 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC00479Q96M42 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC00479Q96M42 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00479Q96M42 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
LINC00479Q96M42 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC00479Q96M42 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC00479Q96M42 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
LINC00479Q96M42 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00479Q96M42 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC00479Q96M42 AP001271.2-201ENST00000624018 1556 ntBASIC14.94□□□□□ -0.02
LINC00479Q96M42 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00479Q96M42 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00479Q96M42 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00479Q96M42 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
LINC00479Q96M42 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00479Q96M42 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
LINC00479Q96M42 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00479Q96M42 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00479Q96M42 AC087633.2-202ENST00000565166 1439 ntBASIC14.94□□□□□ -0.02
LINC00479Q96M42 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00479Q96M42 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC00479Q96M42 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00479Q96M42 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00479Q96M42 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
LINC00479Q96M42 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00479Q96M42 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00479Q96M42 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00479Q96M42 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00479Q96M42 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00479Q96M42 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC00479Q96M42 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC00479Q96M42 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LINC00479Q96M42 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00479Q96M42 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC00479Q96M42 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00479Q96M42 AC008406.3-201ENST00000620001 1374 ntBASIC14.94□□□□□ -0.02
LINC00479Q96M42 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00479Q96M42 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00479Q96M42 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC00479Q96M42 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00479Q96M42 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00479Q96M42 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC00479Q96M42 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00479Q96M42 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00479Q96M42 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LINC00479Q96M42 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00479Q96M42 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LINC00479Q96M42 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00479Q96M42 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00479Q96M42 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00479Q96M42 KRT16P6-202ENST00000425692 1426 ntBASIC14.93□□□□□ -0.02
LINC00479Q96M42 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00479Q96M42 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00479Q96M42 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC00479Q96M42 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC00479Q96M42 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC00479Q96M42 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LINC00479Q96M42 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00479Q96M42 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00479Q96M42 AC006333.2-201ENST00000607957 2099 ntBASIC14.93□□□□□ -0.02
LINC00479Q96M42 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00479Q96M42 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00479Q96M42 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00479Q96M42 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00479Q96M42 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00479Q96M42 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC14.93□□□□□ -0.02
LINC00479Q96M42 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00479Q96M42 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC14.93□□□□□ -0.02
LINC00479Q96M42 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00479Q96M42 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.93□□□□□ -0.02
LINC00479Q96M42 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00479Q96M42 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC00479Q96M42 AL031432.3-201ENST00000607698 485 ntBASIC14.93□□□□□ -0.02
LINC00479Q96M42 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00479Q96M42 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00479Q96M42 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00479Q96M42 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00479Q96M42 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
LINC00479Q96M42 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00479Q96M42 LTB4R2-202ENST00000528054 3092 ntBASIC14.93□□□□□ -0.02
LINC00479Q96M42 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00479Q96M42 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC00479Q96M42 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00479Q96M42 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00479Q96M42 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00479Q96M42 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00479Q96M42 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00479Q96M42 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
LINC00479Q96M42 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00479Q96M42 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00479Q96M42 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00479Q96M42 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00479Q96M42 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00479Q96M42 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms