Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 AL356441.2-201ENST00000443009 864 ntBASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 AC012414.1-201ENST00000556676 535 ntBASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLPTM1LQ96KA5 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.78■□□□□ 0.6
CLPTM1LQ96KA5 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLPTM1LQ96KA5 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CLPTM1LQ96KA5 AL354751.1-201ENST00000412768 1863 ntBASIC18.78■□□□□ 0.6
CLPTM1LQ96KA5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLPTM1LQ96KA5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLPTM1LQ96KA5 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLPTM1LQ96KA5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLPTM1LQ96KA5 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLPTM1LQ96KA5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLPTM1LQ96KA5 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLPTM1LQ96KA5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLPTM1LQ96KA5 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLPTM1LQ96KA5 AL136162.1-201ENST00000607711 1078 ntBASIC18.78■□□□□ 0.6
CLPTM1LQ96KA5 BICD1-207ENST00000551848 1962 ntBASIC18.78■□□□□ 0.6
CLPTM1LQ96KA5 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CLPTM1LQ96KA5 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLPTM1LQ96KA5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLPTM1LQ96KA5 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLPTM1LQ96KA5 NOC2LP2-201ENST00000407594 1944 ntBASIC18.78■□□□□ 0.6
CLPTM1LQ96KA5 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLPTM1LQ96KA5 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLPTM1LQ96KA5 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.78■□□□□ 0.6
CLPTM1LQ96KA5 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLPTM1LQ96KA5 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLPTM1LQ96KA5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLPTM1LQ96KA5 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.77■□□□□ 0.6
CLPTM1LQ96KA5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CLPTM1LQ96KA5 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLPTM1LQ96KA5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLPTM1LQ96KA5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.77■□□□□ 0.6
CLPTM1LQ96KA5 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.77■□□□□ 0.6
CLPTM1LQ96KA5 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CLPTM1LQ96KA5 AP001271.2-201ENST00000624018 1556 ntBASIC18.77■□□□□ 0.6
CLPTM1LQ96KA5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLPTM1LQ96KA5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLPTM1LQ96KA5 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLPTM1LQ96KA5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLPTM1LQ96KA5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLPTM1LQ96KA5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.77■□□□□ 0.6
CLPTM1LQ96KA5 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.77■□□□□ 0.6
CLPTM1LQ96KA5 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.77■□□□□ 0.6
CLPTM1LQ96KA5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CLPTM1LQ96KA5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.77■□□□□ 0.6
CLPTM1LQ96KA5 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.77■□□□□ 0.6
CLPTM1LQ96KA5 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.77■□□□□ 0.6
CLPTM1LQ96KA5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CLPTM1LQ96KA5 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLPTM1LQ96KA5 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLPTM1LQ96KA5 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLPTM1LQ96KA5 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CLPTM1LQ96KA5 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.76■□□□□ 0.59
CLPTM1LQ96KA5 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.76■□□□□ 0.59
CLPTM1LQ96KA5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLPTM1LQ96KA5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPTM1LQ96KA5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CLPTM1LQ96KA5 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.76■□□□□ 0.59
CLPTM1LQ96KA5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CLPTM1LQ96KA5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPTM1LQ96KA5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPTM1LQ96KA5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.76■□□□□ 0.59
CLPTM1LQ96KA5 AL356652.1-201ENST00000615962 565 ntBASIC18.76■□□□□ 0.59
CLPTM1LQ96KA5 AL355001.2-201ENST00000620617 1191 ntBASIC18.76■□□□□ 0.59
CLPTM1LQ96KA5 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPTM1LQ96KA5 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CLPTM1LQ96KA5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLPTM1LQ96KA5 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLPTM1LQ96KA5 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPTM1LQ96KA5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CLPTM1LQ96KA5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPTM1LQ96KA5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms