Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CPNE2Q96FN4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17■□□□□ 0.31
CPNE2Q96FN4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE2Q96FN4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 BID-214ENST00000617586 542 ntTSL 5 BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 OR10C1-204ENST00000622521 1039 ntBASIC16.99■□□□□ 0.31
CPNE2Q96FN4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 PHGDH-210ENST00000641115 1638 ntBASIC16.99■□□□□ 0.31
CPNE2Q96FN4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CPNE2Q96FN4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE2Q96FN4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE2Q96FN4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE2Q96FN4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.98■□□□□ 0.31
CPNE2Q96FN4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE2Q96FN4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE2Q96FN4 CNN2P6-201ENST00000439038 900 ntBASIC16.98■□□□□ 0.31
CPNE2Q96FN4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.98■□□□□ 0.31
CPNE2Q96FN4 DUX4L16-201ENST00000555130 1264 ntBASIC16.98■□□□□ 0.31
CPNE2Q96FN4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.98■□□□□ 0.31
CPNE2Q96FN4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.98■□□□□ 0.31
CPNE2Q96FN4 AC011767.1-201ENST00000617410 1153 ntBASIC16.98■□□□□ 0.31
CPNE2Q96FN4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.98■□□□□ 0.31
CPNE2Q96FN4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.98■□□□□ 0.31
CPNE2Q96FN4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE2Q96FN4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.98■□□□□ 0.31
CPNE2Q96FN4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CPNE2Q96FN4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE2Q96FN4 LETM1P2-201ENST00000597330 2178 ntBASIC16.98■□□□□ 0.31
CPNE2Q96FN4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.98■□□□□ 0.31
CPNE2Q96FN4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE2Q96FN4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE2Q96FN4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE2Q96FN4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE2Q96FN4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CPNE2Q96FN4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CPNE2Q96FN4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE2Q96FN4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE2Q96FN4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.97■□□□□ 0.31
CPNE2Q96FN4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE2Q96FN4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.97■□□□□ 0.31
CPNE2Q96FN4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CPNE2Q96FN4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE2Q96FN4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.97■□□□□ 0.31
CPNE2Q96FN4 AC007322.1-201ENST00000426983 750 ntBASIC16.97■□□□□ 0.31
CPNE2Q96FN4 KRT18P5-201ENST00000436075 1291 ntBASIC16.97■□□□□ 0.31
CPNE2Q96FN4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.97■□□□□ 0.31
CPNE2Q96FN4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.97■□□□□ 0.31
CPNE2Q96FN4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.97■□□□□ 0.31
CPNE2Q96FN4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
CPNE2Q96FN4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE2Q96FN4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE2Q96FN4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.97■□□□□ 0.31
CPNE2Q96FN4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE2Q96FN4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE2Q96FN4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CPNE2Q96FN4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE2Q96FN4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE2Q96FN4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE2Q96FN4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
CPNE2Q96FN4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE2Q96FN4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE2Q96FN4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE2Q96FN4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE2Q96FN4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CPNE2Q96FN4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE2Q96FN4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.96■□□□□ 0.31
CPNE2Q96FN4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE2Q96FN4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE2Q96FN4 AC087623.3-201ENST00000607047 1098 ntBASIC16.96■□□□□ 0.31
CPNE2Q96FN4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE2Q96FN4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE2Q96FN4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.96■□□□□ 0.31
CPNE2Q96FN4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE2Q96FN4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE2Q96FN4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms