Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE4Q96A23 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE4Q96A23 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.59■□□□□ 0.41
CPNE4Q96A23 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE4Q96A23 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE4Q96A23 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.59■□□□□ 0.41
CPNE4Q96A23 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.59■□□□□ 0.41
CPNE4Q96A23 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CPNE4Q96A23 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.59■□□□□ 0.41
CPNE4Q96A23 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.59■□□□□ 0.41
CPNE4Q96A23 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE4Q96A23 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE4Q96A23 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.59■□□□□ 0.41
CPNE4Q96A23 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
CPNE4Q96A23 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CPNE4Q96A23 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE4Q96A23 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CPNE4Q96A23 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.59■□□□□ 0.41
CPNE4Q96A23 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.59■□□□□ 0.41
CPNE4Q96A23 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.58■□□□□ 0.41
CPNE4Q96A23 TMEM179-206ENST00000616017 1645 ntBASIC17.58■□□□□ 0.41
CPNE4Q96A23 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.58■□□□□ 0.41
CPNE4Q96A23 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE4Q96A23 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE4Q96A23 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.58■□□□□ 0.41
CPNE4Q96A23 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE4Q96A23 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE4Q96A23 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE4Q96A23 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CPNE4Q96A23 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE4Q96A23 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE4Q96A23 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.58■□□□□ 0.4
CPNE4Q96A23 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE4Q96A23 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE4Q96A23 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE4Q96A23 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE4Q96A23 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE4Q96A23 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE4Q96A23 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE4Q96A23 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE4Q96A23 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.57■□□□□ 0.4
CPNE4Q96A23 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CPNE4Q96A23 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE4Q96A23 AL135905.2-201ENST00000584934 1404 ntBASIC17.57■□□□□ 0.4
CPNE4Q96A23 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE4Q96A23 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CPNE4Q96A23 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE4Q96A23 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE4Q96A23 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.57■□□□□ 0.4
CPNE4Q96A23 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CPNE4Q96A23 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CPNE4Q96A23 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.57■□□□□ 0.4
CPNE4Q96A23 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.57■□□□□ 0.4
CPNE4Q96A23 TUBB8P6-201ENST00000436895 1288 ntBASIC17.57■□□□□ 0.4
CPNE4Q96A23 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.57■□□□□ 0.4
CPNE4Q96A23 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.57■□□□□ 0.4
CPNE4Q96A23 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.57■□□□□ 0.4
CPNE4Q96A23 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.57■□□□□ 0.4
CPNE4Q96A23 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE4Q96A23 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CPNE4Q96A23 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE4Q96A23 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE4Q96A23 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE4Q96A23 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE4Q96A23 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE4Q96A23 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CPNE4Q96A23 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE4Q96A23 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
CPNE4Q96A23 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE4Q96A23 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.57■□□□□ 0.4
CPNE4Q96A23 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE4Q96A23 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE4Q96A23 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE4Q96A23 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE4Q96A23 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
CPNE4Q96A23 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE4Q96A23 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CPNE4Q96A23 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CPNE4Q96A23 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE4Q96A23 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE4Q96A23 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE4Q96A23 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE4Q96A23 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE4Q96A23 MIR718-201ENST00000390190 70 ntBASIC17.56■□□□□ 0.4
CPNE4Q96A23 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE4Q96A23 AL353807.1-201ENST00000427475 662 ntBASIC17.56■□□□□ 0.4
CPNE4Q96A23 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.56■□□□□ 0.4
CPNE4Q96A23 KRT18P16-201ENST00000510337 1294 ntBASIC17.56■□□□□ 0.4
CPNE4Q96A23 RARRES2P10-201ENST00000564312 460 ntBASIC17.56■□□□□ 0.4
CPNE4Q96A23 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.56■□□□□ 0.4
CPNE4Q96A23 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CPNE4Q96A23 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.56■□□□□ 0.4
CPNE4Q96A23 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE4Q96A23 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE4Q96A23 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.56■□□□□ 0.4
CPNE4Q96A23 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE4Q96A23 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CPNE4Q96A23 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CPNE4Q96A23 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.56■□□□□ 0.4
CPNE4Q96A23 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms