Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPB3Q92617 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPB3Q92617 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPB3Q92617 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPB3Q92617 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.44■□□□□ 0.06
NPIPB3Q92617 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPB3Q92617 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPB3Q92617 AC007322.1-201ENST00000426983 750 ntBASIC15.44■□□□□ 0.06
NPIPB3Q92617 AC006015.1-201ENST00000429970 570 ntBASIC15.44■□□□□ 0.06
NPIPB3Q92617 AC023632.3-201ENST00000521633 145 ntBASIC15.44■□□□□ 0.06
NPIPB3Q92617 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPB3Q92617 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC15.44■□□□□ 0.06
NPIPB3Q92617 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.44■□□□□ 0.06
NPIPB3Q92617 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPB3Q92617 BID-214ENST00000617586 542 ntTSL 5 BASIC15.44■□□□□ 0.06
NPIPB3Q92617 AC231657.2-201ENST00000624556 255 ntBASIC15.44■□□□□ 0.06
NPIPB3Q92617 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPB3Q92617 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPB3Q92617 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.44■□□□□ 0.06
NPIPB3Q92617 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
NPIPB3Q92617 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPB3Q92617 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPB3Q92617 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPB3Q92617 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
NPIPB3Q92617 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
NPIPB3Q92617 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPB3Q92617 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPB3Q92617 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPB3Q92617 AC010980.2-201ENST00000587099 1412 ntBASIC15.43■□□□□ 0.06
NPIPB3Q92617 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPB3Q92617 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.43■□□□□ 0.06
NPIPB3Q92617 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPB3Q92617 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.43■□□□□ 0.06
NPIPB3Q92617 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
NPIPB3Q92617 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.43■□□□□ 0.06
NPIPB3Q92617 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
NPIPB3Q92617 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPB3Q92617 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPB3Q92617 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC15.43■□□□□ 0.06
NPIPB3Q92617 HES2-205ENST00000487437 968 ntTSL 3 BASIC15.43■□□□□ 0.06
NPIPB3Q92617 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.43■□□□□ 0.06
NPIPB3Q92617 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPB3Q92617 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPB3Q92617 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC15.43■□□□□ 0.06
NPIPB3Q92617 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.43■□□□□ 0.06
NPIPB3Q92617 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPB3Q92617 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPB3Q92617 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPB3Q92617 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPB3Q92617 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
NPIPB3Q92617 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPB3Q92617 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.43■□□□□ 0.06
NPIPB3Q92617 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPB3Q92617 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPIPB3Q92617 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
NPIPB3Q92617 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.43■□□□□ 0.06
NPIPB3Q92617 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPB3Q92617 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPB3Q92617 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPB3Q92617 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPB3Q92617 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.42■□□□□ 0.06
NPIPB3Q92617 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPB3Q92617 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPB3Q92617 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPB3Q92617 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPB3Q92617 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPB3Q92617 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPB3Q92617 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPB3Q92617 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.42■□□□□ 0.06
NPIPB3Q92617 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.42■□□□□ 0.06
NPIPB3Q92617 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.42■□□□□ 0.06
NPIPB3Q92617 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.42■□□□□ 0.06
NPIPB3Q92617 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.42■□□□□ 0.06
NPIPB3Q92617 OR10C1-204ENST00000622521 1039 ntBASIC15.42■□□□□ 0.06
NPIPB3Q92617 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPB3Q92617 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.42■□□□□ 0.06
NPIPB3Q92617 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPB3Q92617 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPB3Q92617 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPB3Q92617 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
NPIPB3Q92617 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.42■□□□□ 0.06
NPIPB3Q92617 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPB3Q92617 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPB3Q92617 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.42■□□□□ 0.06
NPIPB3Q92617 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
NPIPB3Q92617 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPB3Q92617 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.42■□□□□ 0.06
NPIPB3Q92617 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NPIPB3Q92617 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPB3Q92617 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPB3Q92617 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPB3Q92617 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.41■□□□□ 0.06
NPIPB3Q92617 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPB3Q92617 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPB3Q92617 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPB3Q92617 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPB3Q92617 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
NPIPB3Q92617 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.41■□□□□ 0.06
NPIPB3Q92617 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPB3Q92617 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms