Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC23.95■■□□□ 1.42
SNED1Q8TER0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC23.95■■□□□ 1.42
SNED1Q8TER0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC23.95■■□□□ 1.42
SNED1Q8TER0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SNED1Q8TER0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
SNED1Q8TER0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SNED1Q8TER0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SNED1Q8TER0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC23.95■■□□□ 1.42
SNED1Q8TER0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SNED1Q8TER0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SNED1Q8TER0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SNED1Q8TER0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
SNED1Q8TER0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC23.94■■□□□ 1.42
SNED1Q8TER0 TPM4P1-201ENST00000436100 807 ntBASIC23.94■■□□□ 1.42
SNED1Q8TER0 HOMER2P1-201ENST00000455653 964 ntBASIC23.94■■□□□ 1.42
SNED1Q8TER0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC23.94■■□□□ 1.42
SNED1Q8TER0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
SNED1Q8TER0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
SNED1Q8TER0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SNED1Q8TER0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC23.94■■□□□ 1.42
SNED1Q8TER0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
SNED1Q8TER0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SNED1Q8TER0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SNED1Q8TER0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
SNED1Q8TER0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SNED1Q8TER0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SNED1Q8TER0 TSPY17P-201ENST00000450329 467 ntBASIC23.93■■□□□ 1.42
SNED1Q8TER0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SNED1Q8TER0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC23.93■■□□□ 1.42
SNED1Q8TER0 AL023973.1-201ENST00000624619 620 ntBASIC23.93■■□□□ 1.42
SNED1Q8TER0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC23.93■■□□□ 1.42
SNED1Q8TER0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
SNED1Q8TER0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SNED1Q8TER0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SNED1Q8TER0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SNED1Q8TER0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
SNED1Q8TER0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SNED1Q8TER0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SNED1Q8TER0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
SNED1Q8TER0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC23.93■■□□□ 1.42
SNED1Q8TER0 AL450487.1-201ENST00000426799 995 ntBASIC23.93■■□□□ 1.42
SNED1Q8TER0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC23.93■■□□□ 1.42
SNED1Q8TER0 CA15P1-201ENST00000481698 905 ntBASIC23.93■■□□□ 1.42
SNED1Q8TER0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC23.93■■□□□ 1.42
SNED1Q8TER0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC23.93■■□□□ 1.42
SNED1Q8TER0 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC23.93■■□□□ 1.42
SNED1Q8TER0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC23.93■■□□□ 1.42
SNED1Q8TER0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SNED1Q8TER0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SNED1Q8TER0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SNED1Q8TER0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SNED1Q8TER0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
SNED1Q8TER0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SNED1Q8TER0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC23.92■■□□□ 1.42
SNED1Q8TER0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC23.92■■□□□ 1.42
SNED1Q8TER0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC23.92■■□□□ 1.42
SNED1Q8TER0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC23.92■■□□□ 1.42
SNED1Q8TER0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SNED1Q8TER0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SNED1Q8TER0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
SNED1Q8TER0 BID-203ENST00000399765 1879 ntTSL 2 BASIC23.91■■□□□ 1.42
SNED1Q8TER0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.91■■□□□ 1.42
SNED1Q8TER0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SNED1Q8TER0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.91■■□□□ 1.42
SNED1Q8TER0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SNED1Q8TER0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC23.91■■□□□ 1.42
SNED1Q8TER0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC23.91■■□□□ 1.42
SNED1Q8TER0 CLEC4GP1-201ENST00000596555 870 ntBASIC23.91■■□□□ 1.42
SNED1Q8TER0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
SNED1Q8TER0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SNED1Q8TER0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC23.91■■□□□ 1.42
SNED1Q8TER0 FP700111.2-201ENST00000619190 1892 ntBASIC23.9■■□□□ 1.42
SNED1Q8TER0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC23.9■■□□□ 1.42
SNED1Q8TER0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
SNED1Q8TER0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SNED1Q8TER0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SNED1Q8TER0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
SNED1Q8TER0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SNED1Q8TER0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC23.9■■□□□ 1.42
SNED1Q8TER0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
SNED1Q8TER0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
SNED1Q8TER0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC23.9■■□□□ 1.42
SNED1Q8TER0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC23.9■■□□□ 1.42
SNED1Q8TER0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC23.9■■□□□ 1.42
SNED1Q8TER0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC23.9■■□□□ 1.42
SNED1Q8TER0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.9■■□□□ 1.42
SNED1Q8TER0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SNED1Q8TER0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SNED1Q8TER0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
SNED1Q8TER0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.89■■□□□ 1.42
SNED1Q8TER0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC23.89■■□□□ 1.42
SNED1Q8TER0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.89■■□□□ 1.41
SNED1Q8TER0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SNED1Q8TER0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SNED1Q8TER0 HYMAI.1-201ENST00000620949 238 ntBASIC23.89■■□□□ 1.41
SNED1Q8TER0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
SNED1Q8TER0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SNED1Q8TER0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SNED1Q8TER0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC23.89■■□□□ 1.41
SNED1Q8TER0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms