Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.11■□□□□ 0.81
RTL3Q8N8U3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.11■□□□□ 0.81
RTL3Q8N8U3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTL3Q8N8U3 TREX1-205ENST00000625293 1783 ntBASIC20.11■□□□□ 0.81
RTL3Q8N8U3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.11■□□□□ 0.81
RTL3Q8N8U3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTL3Q8N8U3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RTL3Q8N8U3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTL3Q8N8U3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTL3Q8N8U3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTL3Q8N8U3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.11■□□□□ 0.81
RTL3Q8N8U3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTL3Q8N8U3 TUBB8P6-201ENST00000436895 1288 ntBASIC20.11■□□□□ 0.81
RTL3Q8N8U3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.11■□□□□ 0.81
RTL3Q8N8U3 AC142381.4-202ENST00000563973 229 ntBASIC20.11■□□□□ 0.81
RTL3Q8N8U3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.11■□□□□ 0.81
RTL3Q8N8U3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.11■□□□□ 0.81
RTL3Q8N8U3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RTL3Q8N8U3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.11■□□□□ 0.81
RTL3Q8N8U3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.11■□□□□ 0.81
RTL3Q8N8U3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
RTL3Q8N8U3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTL3Q8N8U3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.11■□□□□ 0.81
RTL3Q8N8U3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.11■□□□□ 0.81
RTL3Q8N8U3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
RTL3Q8N8U3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.11■□□□□ 0.81
RTL3Q8N8U3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.11■□□□□ 0.81
RTL3Q8N8U3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
RTL3Q8N8U3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.1■□□□□ 0.81
RTL3Q8N8U3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL3Q8N8U3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RTL3Q8N8U3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL3Q8N8U3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL3Q8N8U3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL3Q8N8U3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RTL3Q8N8U3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTL3Q8N8U3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTL3Q8N8U3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL3Q8N8U3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.1■□□□□ 0.81
RTL3Q8N8U3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.1■□□□□ 0.81
RTL3Q8N8U3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.1■□□□□ 0.81
RTL3Q8N8U3 KRT16P5-201ENST00000455284 522 ntBASIC20.1■□□□□ 0.81
RTL3Q8N8U3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
RTL3Q8N8U3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.1■□□□□ 0.81
RTL3Q8N8U3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RTL3Q8N8U3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.1■□□□□ 0.81
RTL3Q8N8U3 FAM197Y4-202ENST00000622692 608 ntBASIC20.1■□□□□ 0.81
RTL3Q8N8U3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTL3Q8N8U3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL3Q8N8U3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL3Q8N8U3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL3Q8N8U3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.1■□□□□ 0.81
RTL3Q8N8U3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTL3Q8N8U3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.1■□□□□ 0.81
RTL3Q8N8U3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RTL3Q8N8U3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.09■□□□□ 0.81
RTL3Q8N8U3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
RTL3Q8N8U3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTL3Q8N8U3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RTL3Q8N8U3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTL3Q8N8U3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.09■□□□□ 0.81
RTL3Q8N8U3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTL3Q8N8U3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTL3Q8N8U3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTL3Q8N8U3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RTL3Q8N8U3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTL3Q8N8U3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTL3Q8N8U3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RTL3Q8N8U3 KRT8P8-201ENST00000434750 1448 ntBASIC20.09■□□□□ 0.81
RTL3Q8N8U3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTL3Q8N8U3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTL3Q8N8U3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RTL3Q8N8U3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RTL3Q8N8U3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTL3Q8N8U3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTL3Q8N8U3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTL3Q8N8U3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RTL3Q8N8U3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTL3Q8N8U3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
RTL3Q8N8U3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTL3Q8N8U3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RTL3Q8N8U3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.08■□□□□ 0.81
RTL3Q8N8U3 AL158047.1-201ENST00000445918 881 ntBASIC20.08■□□□□ 0.81
RTL3Q8N8U3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
RTL3Q8N8U3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.08■□□□□ 0.81
RTL3Q8N8U3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.08■□□□□ 0.81
RTL3Q8N8U3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTL3Q8N8U3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTL3Q8N8U3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
RTL3Q8N8U3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.08■□□□□ 0.8
RTL3Q8N8U3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.08■□□□□ 0.8
RTL3Q8N8U3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTL3Q8N8U3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTL3Q8N8U3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RTL3Q8N8U3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTL3Q8N8U3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RTL3Q8N8U3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RTL3Q8N8U3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.07■□□□□ 0.8
RTL3Q8N8U3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RTL3Q8N8U3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms