Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.37■□□□□ 0.69
CPNE9Q8IYJ1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE9Q8IYJ1 TFP1-202ENST00000475455 1573 ntBASIC19.37■□□□□ 0.69
CPNE9Q8IYJ1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.37■□□□□ 0.69
CPNE9Q8IYJ1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.37■□□□□ 0.69
CPNE9Q8IYJ1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CPNE9Q8IYJ1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE9Q8IYJ1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CPNE9Q8IYJ1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE9Q8IYJ1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE9Q8IYJ1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.37■□□□□ 0.69
CPNE9Q8IYJ1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.37■□□□□ 0.69
CPNE9Q8IYJ1 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.37■□□□□ 0.69
CPNE9Q8IYJ1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE9Q8IYJ1 SOX15-203ENST00000570788 1093 ntBASIC19.37■□□□□ 0.69
CPNE9Q8IYJ1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.37■□□□□ 0.69
CPNE9Q8IYJ1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE9Q8IYJ1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE9Q8IYJ1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE9Q8IYJ1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE9Q8IYJ1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.37■□□□□ 0.69
CPNE9Q8IYJ1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE9Q8IYJ1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE9Q8IYJ1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE9Q8IYJ1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE9Q8IYJ1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.36■□□□□ 0.69
CPNE9Q8IYJ1 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.36■□□□□ 0.69
CPNE9Q8IYJ1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.36■□□□□ 0.69
CPNE9Q8IYJ1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.36■□□□□ 0.69
CPNE9Q8IYJ1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.36■□□□□ 0.69
CPNE9Q8IYJ1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.36■□□□□ 0.69
CPNE9Q8IYJ1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE9Q8IYJ1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE9Q8IYJ1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.36■□□□□ 0.69
CPNE9Q8IYJ1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE9Q8IYJ1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE9Q8IYJ1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE9Q8IYJ1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE9Q8IYJ1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.36■□□□□ 0.69
CPNE9Q8IYJ1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE9Q8IYJ1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CPNE9Q8IYJ1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE9Q8IYJ1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE9Q8IYJ1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE9Q8IYJ1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CPNE9Q8IYJ1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms