Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPNE8Q86YQ8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.52■□□□□ 0.88
CPNE8Q86YQ8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CPNE8Q86YQ8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
CPNE8Q86YQ8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.52■□□□□ 0.87
CPNE8Q86YQ8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CPNE8Q86YQ8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.51■□□□□ 0.87
CPNE8Q86YQ8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CPNE8Q86YQ8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE8Q86YQ8 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
CPNE8Q86YQ8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE8Q86YQ8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE8Q86YQ8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE8Q86YQ8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.51■□□□□ 0.87
CPNE8Q86YQ8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE8Q86YQ8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.51■□□□□ 0.87
CPNE8Q86YQ8 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.51■□□□□ 0.87
CPNE8Q86YQ8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE8Q86YQ8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.51■□□□□ 0.87
CPNE8Q86YQ8 AL109923.1-201ENST00000618799 583 ntBASIC20.51■□□□□ 0.87
CPNE8Q86YQ8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CPNE8Q86YQ8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE8Q86YQ8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE8Q86YQ8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE8Q86YQ8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CPNE8Q86YQ8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE8Q86YQ8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE8Q86YQ8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE8Q86YQ8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE8Q86YQ8 AC092368.3-202ENST00000574180 1591 ntBASIC20.51■□□□□ 0.87
CPNE8Q86YQ8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE8Q86YQ8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.5■□□□□ 0.87
CPNE8Q86YQ8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.5■□□□□ 0.87
CPNE8Q86YQ8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE8Q86YQ8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE8Q86YQ8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.5■□□□□ 0.87
CPNE8Q86YQ8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CPNE8Q86YQ8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE8Q86YQ8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE8Q86YQ8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.5■□□□□ 0.87
CPNE8Q86YQ8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.5■□□□□ 0.87
CPNE8Q86YQ8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.5■□□□□ 0.87
CPNE8Q86YQ8 AC090192.1-201ENST00000517740 490 ntBASIC20.5■□□□□ 0.87
CPNE8Q86YQ8 MIR4758-201ENST00000577688 71 ntBASIC20.5■□□□□ 0.87
CPNE8Q86YQ8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE8Q86YQ8 AC104771.1-201ENST00000603335 964 ntBASIC20.5■□□□□ 0.87
CPNE8Q86YQ8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.5■□□□□ 0.87
CPNE8Q86YQ8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.5■□□□□ 0.87
CPNE8Q86YQ8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.5■□□□□ 0.87
CPNE8Q86YQ8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE8Q86YQ8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE8Q86YQ8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE8Q86YQ8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE8Q86YQ8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE8Q86YQ8 AL049812.1-201ENST00000432563 2267 ntBASIC20.5■□□□□ 0.87
CPNE8Q86YQ8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CPNE8Q86YQ8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE8Q86YQ8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE8Q86YQ8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CPNE8Q86YQ8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.49■□□□□ 0.87
CPNE8Q86YQ8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE8Q86YQ8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE8Q86YQ8 AL390719.1-204ENST00000412397 1219 ntBASIC20.49■□□□□ 0.87
CPNE8Q86YQ8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.49■□□□□ 0.87
CPNE8Q86YQ8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE8Q86YQ8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CPNE8Q86YQ8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE8Q86YQ8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.49■□□□□ 0.87
CPNE8Q86YQ8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE8Q86YQ8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE8Q86YQ8 LINC01465-201ENST00000408887 1940 ntBASIC20.49■□□□□ 0.87
CPNE8Q86YQ8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE8Q86YQ8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.49■□□□□ 0.87
CPNE8Q86YQ8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CPNE8Q86YQ8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE8Q86YQ8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE8Q86YQ8 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE8Q86YQ8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE8Q86YQ8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE8Q86YQ8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE8Q86YQ8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE8Q86YQ8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.48■□□□□ 0.87
CPNE8Q86YQ8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE8Q86YQ8 AC097658.1-201ENST00000475555 843 ntBASIC20.48■□□□□ 0.87
CPNE8Q86YQ8 PNMA6B-201ENST00000538162 1200 ntBASIC20.48■□□□□ 0.87
CPNE8Q86YQ8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.48■□□□□ 0.87
CPNE8Q86YQ8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CPNE8Q86YQ8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.48■□□□□ 0.87
CPNE8Q86YQ8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CPNE8Q86YQ8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CPNE8Q86YQ8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE8Q86YQ8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CPNE8Q86YQ8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CPNE8Q86YQ8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.48■□□□□ 0.87
CPNE8Q86YQ8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE8Q86YQ8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE8Q86YQ8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE8Q86YQ8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE8Q86YQ8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE8Q86YQ8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms