Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF111Q6ZNA4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF111Q6ZNA4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RNF111Q6ZNA4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF111Q6ZNA4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF111Q6ZNA4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF111Q6ZNA4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF111Q6ZNA4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF111Q6ZNA4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF111Q6ZNA4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF111Q6ZNA4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF111Q6ZNA4 LSM12P1-201ENST00000411836 588 ntBASIC18.99■□□□□ 0.63
RNF111Q6ZNA4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.99■□□□□ 0.63
RNF111Q6ZNA4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF111Q6ZNA4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF111Q6ZNA4 AL589743.5-201ENST00000616611 1050 ntBASIC18.99■□□□□ 0.63
RNF111Q6ZNA4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RNF111Q6ZNA4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF111Q6ZNA4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF111Q6ZNA4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF111Q6ZNA4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF111Q6ZNA4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RNF111Q6ZNA4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF111Q6ZNA4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF111Q6ZNA4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 AC104581.1-202ENST00000635932 2618 ntBASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 MIPEPP3-201ENST00000412105 444 ntBASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 AL356652.1-201ENST00000615962 565 ntBASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 BX119927.1-201ENST00000636596 1552 ntBASIC18.98■□□□□ 0.63
RNF111Q6ZNA4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 CROCCP3-202ENST00000420820 1947 ntBASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF111Q6ZNA4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF111Q6ZNA4 AL032819.2-201ENST00000624543 2162 ntBASIC18.96■□□□□ 0.63
RNF111Q6ZNA4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RNF111Q6ZNA4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF111Q6ZNA4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF111Q6ZNA4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RNF111Q6ZNA4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF111Q6ZNA4 AL355802.2-201ENST00000402069 882 ntBASIC18.96■□□□□ 0.63
RNF111Q6ZNA4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF111Q6ZNA4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
RNF111Q6ZNA4 AC105020.6-201ENST00000621523 1217 ntBASIC18.96■□□□□ 0.63
RNF111Q6ZNA4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF111Q6ZNA4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF111Q6ZNA4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF111Q6ZNA4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF111Q6ZNA4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF111Q6ZNA4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms