Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.34■□□□□ 0.85
LRRC38Q5VT99 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC38Q5VT99 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC38Q5VT99 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC38Q5VT99 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC38Q5VT99 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LRRC38Q5VT99 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.34■□□□□ 0.85
LRRC38Q5VT99 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.34■□□□□ 0.85
LRRC38Q5VT99 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC38Q5VT99 AL138781.1-201ENST00000566567 1274 ntBASIC20.34■□□□□ 0.85
LRRC38Q5VT99 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.34■□□□□ 0.85
LRRC38Q5VT99 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
LRRC38Q5VT99 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.34■□□□□ 0.85
LRRC38Q5VT99 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LRRC38Q5VT99 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.34■□□□□ 0.85
LRRC38Q5VT99 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.34■□□□□ 0.85
LRRC38Q5VT99 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC38Q5VT99 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC38Q5VT99 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC38Q5VT99 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.34■□□□□ 0.85
LRRC38Q5VT99 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRRC38Q5VT99 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
LRRC38Q5VT99 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRRC38Q5VT99 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.33■□□□□ 0.85
LRRC38Q5VT99 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LRRC38Q5VT99 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.33■□□□□ 0.85
LRRC38Q5VT99 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRRC38Q5VT99 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRRC38Q5VT99 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRRC38Q5VT99 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.33■□□□□ 0.85
LRRC38Q5VT99 YBX1P10-201ENST00000444752 975 ntBASIC20.33■□□□□ 0.85
LRRC38Q5VT99 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.33■□□□□ 0.85
LRRC38Q5VT99 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.33■□□□□ 0.85
LRRC38Q5VT99 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.33■□□□□ 0.85
LRRC38Q5VT99 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.33■□□□□ 0.85
LRRC38Q5VT99 AC120498.8-201ENST00000614275 531 ntBASIC20.33■□□□□ 0.85
LRRC38Q5VT99 AC133041.1-202ENST00000642053 222 ntBASIC20.33■□□□□ 0.85
LRRC38Q5VT99 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRRC38Q5VT99 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
LRRC38Q5VT99 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRRC38Q5VT99 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRRC38Q5VT99 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRRC38Q5VT99 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.33■□□□□ 0.84
LRRC38Q5VT99 ZNF815P-204ENST00000434898 1737 ntBASIC20.33■□□□□ 0.84
LRRC38Q5VT99 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRRC38Q5VT99 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRC38Q5VT99 AP006587.1-201ENST00000534129 1502 ntBASIC20.32■□□□□ 0.84
LRRC38Q5VT99 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.32■□□□□ 0.84
LRRC38Q5VT99 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRC38Q5VT99 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.32■□□□□ 0.84
LRRC38Q5VT99 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRC38Q5VT99 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRC38Q5VT99 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRC38Q5VT99 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRRC38Q5VT99 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRRC38Q5VT99 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.32■□□□□ 0.84
LRRC38Q5VT99 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.32■□□□□ 0.84
LRRC38Q5VT99 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.32■□□□□ 0.84
LRRC38Q5VT99 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.32■□□□□ 0.84
LRRC38Q5VT99 AC098934.4-201ENST00000564127 592 ntBASIC20.32■□□□□ 0.84
LRRC38Q5VT99 AC142086.2-201ENST00000569753 217 ntBASIC20.32■□□□□ 0.84
LRRC38Q5VT99 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRC38Q5VT99 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRRC38Q5VT99 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRRC38Q5VT99 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.32■□□□□ 0.84
LRRC38Q5VT99 TNXA-203ENST00000507684 2038 ntBASIC20.32■□□□□ 0.84
LRRC38Q5VT99 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LRRC38Q5VT99 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRC38Q5VT99 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
LRRC38Q5VT99 LINC01465-201ENST00000408887 1940 ntBASIC20.31■□□□□ 0.84
LRRC38Q5VT99 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRC38Q5VT99 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRC38Q5VT99 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRC38Q5VT99 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.31■□□□□ 0.84
LRRC38Q5VT99 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LRRC38Q5VT99 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.31■□□□□ 0.84
LRRC38Q5VT99 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.31■□□□□ 0.84
LRRC38Q5VT99 AC069152.1-201ENST00000438030 544 ntBASIC20.31■□□□□ 0.84
LRRC38Q5VT99 AL109923.1-201ENST00000618799 583 ntBASIC20.31■□□□□ 0.84
LRRC38Q5VT99 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRC38Q5VT99 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.31■□□□□ 0.84
LRRC38Q5VT99 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRC38Q5VT99 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRC38Q5VT99 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.31■□□□□ 0.84
LRRC38Q5VT99 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.31■□□□□ 0.84
LRRC38Q5VT99 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC38Q5VT99 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
LRRC38Q5VT99 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
LRRC38Q5VT99 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC38Q5VT99 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC38Q5VT99 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC38Q5VT99 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC38Q5VT99 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.3■□□□□ 0.84
LRRC38Q5VT99 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.3■□□□□ 0.84
LRRC38Q5VT99 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.3■□□□□ 0.84
LRRC38Q5VT99 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.3■□□□□ 0.84
LRRC38Q5VT99 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.3■□□□□ 0.84
LRRC38Q5VT99 AL121829.2-201ENST00000620908 328 ntBASIC20.3■□□□□ 0.84
LRRC38Q5VT99 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC38Q5VT99 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms